RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 GAPDHP04406 335 aaKnown RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 DBIP07108 87 aaKnown RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 ME2P23368 584 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 RFX3P48380 749 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 CRISP3P54108 245 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 HPCAP84074 193 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF117Q03924 483 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 MRPL28Q13084 256 aaKnown RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 FADDQ13158 208 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 STX5Q13190 355 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SKP2Q13309 424 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OR5I1Q13606 314 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 GK3PQ14409 553 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 MICBQ29980 383 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 CCNJQ5T5M9 372 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 C3orf33Q6P1S2 294 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SSX8Q7RTT4 187 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 FAM220AQ7Z4H9 259 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 RPP25LQ8N5L8 163 aaKnown RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SDR9C7Q8NEX9 313 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OR52I1Q8NGK6 324 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OR1L6Q8NGR2 347 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OR6K3Q8NGY3 331 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OR5AK3PQ8NH89 298 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OR2V1Q8NHB1 315 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 KCNG3Q8TAE7 436 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 DYDC1Q8WWB3 177 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 GTF2H4Q92759 462 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 CPNE4Q96A23 557 aaPredicted RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 ROPN1LQ96C74 230 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 CHMP6Q96FZ7 201 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 TEX37Q96LM6 180 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 PPP1R36Q96LQ0 422 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OXGR1Q96P68 337 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 OR52B2Q96RD2 323 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 EBF4Q9BQW3 602 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 NICN1Q9BSH3 213 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SELENOIQ9C0D9 397 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SLC38A1Q9H2H9 487 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 TPT1P8Q9HAU6 139 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 BCL2L10Q9HD36 194 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 MED4Q9NPJ6 270 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 ACER3Q9NUN7 267 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SLC2A8Q9NY64 477 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SLC7A8Q9UHI5 535 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 IKZF2Q9UKS7 526 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 MCTS1Q9ULC4 181 aaKnown RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 KCNIP3Q9Y2W7 256 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 KCNE3Q9Y6H6 103 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 MED12LQ86YW9 2145 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 KMT2AQ03164 3969 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 NUP214P35658 2090 aaPredicted RBP3.76□□□□□ -1.81
UPF3A-205ENST00000479712 IGHV3OR16-13A0A075B7E8 117 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 IGKV1D-8A0A087WSZ0 117 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 A0A1W2PPE3 182 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 C17orf51A8MQB3 221 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 LOC110117498-PIK3R3F6TDL0 507 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 H6PDO95479 791 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 CSTAP01040 98 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 TFPTP0C1Z6 253 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 OR12D1P0DN82 309 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 GPX2P18283 190 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 CDKN2CP42773 168 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 GSSP48637 474 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 GPM6AP51674 278 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 EFNA4P52798 201 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 AQP5P55064 265 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 CARD18P57730 90 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 DSTNP60981 165 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 SCRN3Q0VDG4 424 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 FUT5Q11128 374 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 FOXF1Q12946 379 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 PON3Q15166 354 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 QPRTQ15274 297 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 RGNQ15493 299 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 SLC9A3R2Q15599 337 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 LIN52Q52LA3 116 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 COQ5Q5HYK3 327 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
UPF3A-205ENST00000479712 HBMQ6B0K9 141 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 C11orf71Q6IPW1 123 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 TNFAIP8L2Q6P589 184 aaPredicted RBP3.76□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF621Q6ZSS3 439 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 GRINAQ7Z429 371 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 FUNDC1Q8IVP5 155 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 RDH10Q8IZV5 341 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 C14orf178Q8N769 122 aaPredicted RBP3.76□□□□□ -1.81
UPF3A-205ENST00000479712 BBS1Q8NFJ9 593 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 OR5D16Q8NGK9 328 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 OR10D3Q8NH80 312 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 FNDC9Q8TBE3 224 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 STARD4Q96DR4 205 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 PLEKHA8Q96JA3 519 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 RNF145Q96MT1 663 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 CNN2Q99439 309 aaKnown RBP3.76□□□□□ -1.81
UPF3A-205ENST00000479712 GPR61Q9BZJ8 451 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 ARMC7Q9H6L4 198 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 NIPAL2Q9H841 368 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 C12orf10Q9HB07 376 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms