RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 RPS19BP1Q86WX3 136 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 SNX22Q96L94 193 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 PLEKHF2Q9H8W4 249 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 HSPB1P04792 205 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 SSR4P51571 173 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 Q0VFX4 171 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 C10orf128Q5T292 105 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 TBC1D26Q86UD7 250 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 FAM210BQ96KR6 192 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 SPOCK3Q9BQ16 436 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 ULBP2Q9BZM5 246 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 SH2D2AQ9NP31 389 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 A0A087X0M5 115 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 A0A1B0GX30 115 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 H3BP45 60 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 PLA2G5P39877 138 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 HERV-K104P61576 105 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 LPAL2Q16609 132 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 Q6ZSR3 168 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF100Q8IYN0 542 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 ALKBH3Q96Q83 286 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF286AQ9HBT8 521 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 CRLF2Q9HC73 371 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 SLC7A10Q9NS82 523 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 GNG13Q9P2W3 67 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 URB1O60287 2271 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 PHOX2AO14813 284 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 CDS2O95674 445 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 DSCR4P56555 118 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 RAB11AP62491 216 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 HLA-DRB3P79483 266 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 MPV17LQ2QL34 196 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 SPIN3Q5JUX0 258 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF880Q6PDB4 577 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 AGBL5Q8NDL9 886 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 PACRGQ96M98 296 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 SIGLEC12Q96PQ1 595 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 HIST1H2BLQ99880 126 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 WDR54Q9H977 334 aa11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 UBE2J1Q9Y385 318 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-208ENST00000479530 FAM186AA6NE01 2351 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF732B4DXR9 585 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 SLC31A2O15432 143 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 PTBP3O95758 552 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 IGHV3-9P01782 118 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 B4GALT1P15291 398 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 IL2RGP31785 369 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 B3GALT5-AS1P59052 145 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 SPCS3P61009 180 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 SLC35E3Q7Z769 313 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF695Q8IW36 515 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 SELENOHQ8IZQ5 122 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 OSR2Q8N2R0 312 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 BORCS8Q96FH0 119 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 PRO3102Q9H379 93 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 SIRT7Q9NRC8 400 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 KIAA2026Q5HYC2 2103 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 BTBD17A6NE02 478 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 ZFP92A6NM28 416 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 CHST1O43916 411 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 CD200P41217 278 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 CLDN15P56746 228 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 HIST1H3AP68431 136 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 ZFP36L1Q07352 338 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 IL11RAQ14626 422 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 AKR1C8PQ5T2L2 129 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 HIST2H3PS2Q5TEC6 136 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 SLC23A3Q6PIS1 610 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF818PQ6ZRF7 136 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 REC114Q7Z4M0 266 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 DPPA2Q7Z7J5 298 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 OR8G5Q8NG78 346 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 PLPPR1Q8TBJ4 325 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 SPSB1Q96BD6 273 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
PDZRN3-208ENST00000479530 CHD3Q12873 2000 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 NCOR1O75376 2440 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 HSPA12AO43301 675 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 NPBWR2P48146 333 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 CASP6P55212 293 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 UCP3P55916 312 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 MLF1P58340 268 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 TAS2R60P59551 318 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 VAMP2P63027 116 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 SSX2Q16385 188 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 CCDC71LQ8N9Z2 235 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 SLC25A31Q9H0C2 315 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 IGKV1D-13A0A0B4J2D9 117 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 CXCL13O43927 109 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 OR7C1O76099 320 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 HLA-HP01893 362 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 CD55P08174 381 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 IGKV1-13P0DP09 117 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 OTX2P32243 289 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 FGF8P55075 233 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 PKIAP61925 76 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms