RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 CASTOR1Q8WTX7 329 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 TMED6Q8WW62 240 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 THRSPQ92748 146 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 SLC35B4Q969S0 331 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 SGK3Q96BR1 496 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 ZNF799Q96GE5 643 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 NMNAT3Q96T66 252 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 SPAG8Q99932 426 aaPredicted RBP3.05□□□□□ -1.92
COPS7B-220ENST00000479430 ATF6BQ99941 703 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 NABP2Q9BQ15 211 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 PAPOLGQ9BWT3 736 aaKnown RBP3.05□□□□□ -1.92
COPS7B-220ENST00000479430 PARD6BQ9BYG5 372 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 RBM38Q9H0Z9 239 aaKnown RBP3.05□□□□□ -1.92
COPS7B-220ENST00000479430 RAB18Q9NP72 206 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 LAMP5Q9UJQ1 280 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 ZNF256Q9Y2P7 627 aaPredicted RBP3.05□□□□□ -1.92
COPS7B-220ENST00000479430 V9GYY5 206 aaPredicted RBP3.05□□□□□ -1.92
COPS7B-220ENST00000479430 HSPG2P98160 4391 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 PKD1P98161 4303 aa3.05□□□□□ -1.92
COPS7B-220ENST00000479430 AGRNO00468 2067 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 A0A087WUU8 490 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 PRORSD1PA6NEY8 169 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 A6NIZ1 184 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ODF3BA8MYP8 253 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 CENPBD1B2RD01 187 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 GMDSO60547 372 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 DUS4LO95620 317 aaKnown RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 FSTL3O95633 263 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 CD14P08571 375 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 TROVE2P10155 538 aaKnown RBP eCLIP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 CLUP10909 449 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 IDO1P14902 403 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 MUC1P15941 1255 aaPredicted RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 HIST1H1CP16403 213 aaKnown RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ZNF823P16415 610 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 GPX2P18283 190 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 MYCNOSP40205 109 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 GZMMP51124 257 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 SLC25A1P53007 311 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 EDDM3BP56851 147 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 OR12D2P58182 307 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 KRTAP10-2P60368 255 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 RAP1BP61224 184 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ACTA2P62736 377 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 RAP1AP62834 184 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 HERV-K104P63124 156 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ACTG2P63267 376 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ACTC1P68032 377 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ACTA1P68133 377 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 RPL24P83731 157 aaKnown RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 CBX1P83916 185 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 IFFO1Q0D2I5 559 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 PRDX4Q13162 271 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 RBM39Q14498 530 aaKnown RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 WHAMMP3Q1A5X7 153 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ZBED5Q49AG3 693 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 PRAMEF5Q5TYX0 476 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 AGBL2Q5U5Z8 902 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 SMARCD3Q6STE5 483 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 SLC16A9Q7RTY1 509 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 HDDC2Q7Z4H3 204 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 DCXRQ7Z4W1 244 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 TMEM179BQ7Z7N9 219 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 DHDDSQ86SQ9 333 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ZNF554Q86TJ5 538 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ZNF573Q86YE8 665 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 RNF148Q8N7C7 305 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 NRACQ8N912 160 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 OR52J3Q8NH60 311 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 TRMT10AQ8TBZ6 339 aaKnown RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 CAPSLQ8WWF8 208 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 HPSE2Q8WWQ2 592 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 FCGR1BQ92637 280 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 STMN2Q93045 179 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 LEAP2Q969E1 77 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ISOC1Q96CN7 298 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 REEP6Q96HR9 211 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 RNF170Q96K19 258 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ERMAPQ96PL5 475 aaPredicted RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 AMELYQ99218 206 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 COPS4Q9BT78 406 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 TTTY10Q9BZA0 68 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 CHST6Q9GZX3 395 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 HDHD2Q9H0R4 259 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 RIBC2Q9H4K1 309 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 TMEM38AQ9H6F2 299 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 DCLRE1BQ9H816 532 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 HEXA-AS1Q9H8Q6 139 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 MED20Q9H944 212 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 GNB4Q9HAV0 340 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 SDR39U1Q9NRG7 319 aaPredicted RBP3.04□□□□□ -1.92
COPS7B-220ENST00000479430 VNN3Q9NY84 501 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 ZNF222Q9UK12 451 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 STUB1Q9UNE7 303 aa3.04□□□□□ -1.92
COPS7B-220ENST00000479430 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.92
COPS7B-220ENST00000479430 IGLV5-37A0A075B6J1 123 aa3.03□□□□□ -1.92
COPS7B-220ENST00000479430 IGHV3-72A0A0B4J1Y9 119 aa3.03□□□□□ -1.92
COPS7B-220ENST00000479430 TRBV4-1A0A0J9YWV2 114 aa3.03□□□□□ -1.92
COPS7B-220ENST00000479430 A0A1W2PPE3 182 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms