RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CNIH3Q8TBE1 160 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 WWC2-AS2Q96NR7 200 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 ZMAT5Q9UDW3 170 aaKnown RBP10.48□□□□□ -0.73
VCL-205ENST00000478896 TRAV24A0A0B4J272 114 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 TMEM212A6NML5 194 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 J3QRE1 110 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 HSD17B6O14756 317 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 CIB2O75838 187 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 RAB3AP20336 220 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 IL13RA2Q14627 380 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 RSU1Q15404 277 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 LHFPL3Q86UP9 236 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 STPG2Q8N412 459 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 COMMD1Q8N668 190 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 PXT1Q8NFP0 134 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 OR5AK2Q8NH90 309 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 TNFAIP8L1Q8WVP5 186 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 DUX3Q96PT4 197 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 FAM118AQ9NWS6 357 aa10.47□□□□□ -0.73
VCL-205ENST00000478896 A0A1W2PPE3 182 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 NCBP2LA6PVI3 153 aaKnown RBP10.46□□□□□ -0.73
VCL-205ENST00000478896 GABRPO00591 440 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 EI24O14681 340 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 ZFPL1O95159 310 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 IGHG2P01859 326 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 RPSAP08865 295 aaKnown RBP10.46□□□□□ -0.73
VCL-205ENST00000478896 CGB3P0DN86 165 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 CGB7P0DN87 165 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 REG1BP48304 166 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 KCNJ3P48549 501 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 SNRPGP62308 76 aaKnown RBP10.46□□□□□ -0.73
VCL-205ENST00000478896 DGCR2P98153 550 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 GALEQ14376 348 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 PIGYQ3MUY2 71 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 ZIK1Q3SY52 487 aaPredicted RBP10.46□□□□□ -0.73
VCL-205ENST00000478896 RSBN1Q5VWQ0 802 aaPredicted RBP10.46□□□□□ -0.73
VCL-205ENST00000478896 ELP2Q6IA86 826 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 MOB3BQ86TA1 216 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 ZNF695Q8IW36 515 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 PARP16Q8N5Y8 322 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 OR10K1Q8NGX5 313 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 PLPPR1Q8TBJ4 325 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 TFAP2CQ92754 450 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 LGALS12Q96DT0 336 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 PDCD1LG2Q9BQ51 273 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 NCOR1P1Q9H4R4 102 aa10.46□□□□□ -0.73
VCL-205ENST00000478896 ISG20L2Q9H9L3 353 aaKnown RBP10.46□□□□□ -0.73
VCL-205ENST00000478896 EXOGQ9Y2C4 368 aaKnown RBP10.46□□□□□ -0.73
VCL-205ENST00000478896 IGHV3-72A0A0B4J1Y9 119 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 TRAV39A0A0B4J263 110 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 NPIPB11E5RHQ5 1161 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 AP4M1O00189 453 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 CCRL2O00421 344 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 HTR3BO95264 441 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 MRPL28Q13084 256 aaKnown RBP10.45□□□□□ -0.74
VCL-205ENST00000478896 SLC25A30Q5SVS4 291 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 TEX38Q6PEX7 206 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 SYS1Q8N2H4 156 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 OR10A7Q8NGE5 316 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 OR51A2Q8NGJ7 313 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 PYDC1Q8WXC3 89 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 P2RX4Q99571 388 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 DPCDQ9BVM2 203 aaPredicted RBP10.45□□□□□ -0.74
VCL-205ENST00000478896 AASSQ9UDR5 926 aa10.45□□□□□ -0.74
VCL-205ENST00000478896 IGHV1-3A0A0C4DH29 117 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 H0YHG0 523 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 CCL24O00175 119 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 RRP9O43818 475 aaKnown RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 RAMP3O60896 148 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 ATP5HO75947 161 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 OR7C1O76099 320 aaPredicted RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 FADS2O95864 444 aaKnown RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 CSTBP04080 98 aaKnown RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 GAPDHP04406 335 aaKnown RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 ALPLP05186 524 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 IL3RAP26951 378 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 SOX2P48431 317 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 GBX2P52951 348 aaPredicted RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 GP2P55259 537 aaKnown RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 ZNF816Q0VGE8 651 aaPredicted RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 CXorf66Q5JRM2 361 aaPredicted RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 SLC16A12Q6ZSM3 486 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 SUMF2Q8NBJ7 301 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 OR8U1Q8NH10 309 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 NEK7Q8TDX7 302 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 S100A13Q99584 98 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 GON7Q9BXV9 100 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 LINC00574Q9H8X3 128 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 LIN7CQ9NUP9 197 aaKnown RBP10.44□□□□□ -0.74
VCL-205ENST00000478896 TAS2R4Q9NYW5 299 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 ST3GAL6Q9Y274 331 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 GMPPBQ9Y5P6 360 aa10.44□□□□□ -0.74
VCL-205ENST00000478896 TMEM30CPA0ZSE6 113 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 SDCBPO00560 298 aaPredicted RBP10.43□□□□□ -0.74
VCL-205ENST00000478896 MPZL2O60487 215 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 CDRT1O95170 752 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 RPLP1P05386 114 aaKnown RBP10.43□□□□□ -0.74
VCL-205ENST00000478896 CD2P06729 351 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 SERPINA2P20848 420 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 GPR12P47775 334 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms