RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 HBA1P69905 142 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 PRB3Q04118 309 aaPredicted RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 LIN52Q52LA3 116 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 C10orf128Q5T292 105 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 OR2T2Q6IF00 324 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 HCP5Q6MZN7 132 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 CEMP1Q6PRD7 247 aaPredicted RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 CD164L2Q6UWJ8 174 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 OLIG3Q7RTU3 272 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 DHDDSQ86SQ9 333 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 EGFL6Q8IUX8 553 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 SLC22A9Q8IVM8 553 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 OR5AS1Q8N127 324 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 OR6Q1Q8NGQ2 317 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 OR5AK3PQ8NH89 298 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 AKR7LQ8NHP1 331 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 DNAJA4Q8WW22 397 aaPredicted RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 ACOT11Q8WXI4 607 aaPredicted RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 DUS3LQ96G46 650 aaKnown RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 SLC35G5Q96KT7 338 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 ZIM3Q96PE6 472 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 SLC38A1Q9H2H9 487 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 MID1IP1Q9NPA3 183 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 RPS6KB2Q9UBS0 482 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 DIMT1Q9UNQ2 313 aaKnown RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 APOBP04114 4563 aaKnown RBP3.21□□□□□ -1.9
VPS50-214ENST00000477935 PKD1P98161 4303 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 IGHV3-64DA0A0J9YX35 117 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 RNF103-CHMP3A0A140T963 221 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 TRIM64CA6NLI5 447 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 C12orf71A8MTZ7 269 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 GMDSO60547 372 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 FCN3O75636 299 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 GSTA1P08263 222 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 SNRPAP09012 282 aaKnown RBP3.21□□□□□ -1.9
VPS50-214ENST00000477935 ETS2P15036 469 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 SPNP16150 400 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 ZNF19P17023 458 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 OR3A4PP47883 348 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 DLX1P56177 255 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 CAV3P56539 151 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 OR12D2P58182 307 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 ERVK-25P63136 954 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 C2orf54Q08AI8 447 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 MPPED2Q15777 294 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 SSX2Q16385 188 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 SGCAQ16586 387 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 ABCA11PQ4W5N1 156 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 HHATQ5VTY9 493 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 ULK3Q6PHR2 472 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 C10orf99Q6UWK7 81 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 SLC30A8Q8IWU4 369 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 DRAM1Q8N682 238 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 ANKFN1Q8N957 763 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 OR9Q1Q8NGQ5 310 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 OR5J2Q8NH18 312 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 OR52P1PQ8NH57 321 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 OR5K1Q8NHB7 308 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 FNDC8Q8TC99 324 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 CYYR1Q96J86 154 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 KCNA7Q96RP8 456 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 CCL13Q99616 98 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 FUNDC2Q9BWH2 189 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 HCAR1Q9BXC0 346 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 GON7Q9BXV9 100 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 MRPL13Q9BYD1 178 aaKnown RBP3.21□□□□□ -1.9
VPS50-214ENST00000477935 CACYBPQ9HB71 228 aaKnown RBP3.21□□□□□ -1.9
VPS50-214ENST00000477935 UFSP2Q9NUQ7 469 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 CALML5Q9NZT1 146 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 SNX5Q9Y5X3 404 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 DNAH6Q9C0G6 4158 aa3.21□□□□□ -1.9
VPS50-214ENST00000477935 DNAH5Q8TE73 4624 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 IGKV1D-42A0A075B6H8 117 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 IGHV3OR16-12A0A075B7B8 117 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 PGRMC1O00264 195 aaKnown RBP3.2□□□□□ -1.9
VPS50-214ENST00000477935 HMGN4O00479 90 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 RNF13O43567 381 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 OR2F2O95006 317 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 BGLAPP02818 100 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 HLA-DPB1P04440 258 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 OR8U8P0C7N1 319 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 PAX6P26367 422 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 LAP3P28838 519 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 BRS3P32247 399 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 NAA10P41227 235 aaPredicted RBP3.2□□□□□ -1.9
VPS50-214ENST00000477935 POU3F4P49335 361 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 ARHGDIBP52566 201 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 SLC25A1P53007 311 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 TCTAP57738 103 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 SCRN3Q0VDG4 424 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 FUT5Q11128 374 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 IL18R1Q13478 541 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 BEND6Q5SZJ8 279 aaPredicted RBP3.2□□□□□ -1.9
VPS50-214ENST00000477935 MINOS1Q5TGZ0 78 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 PRAMEF6Q5VXH4 476 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 TNFAIP8L2Q6P589 184 aaPredicted RBP3.2□□□□□ -1.9
VPS50-214ENST00000477935 ZCCHC23Q6ZST2 131 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 HMGN2P46Q86SG4 172 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 LCA5Q86VQ0 697 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms