RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 EFNB2P52799 333 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 YPEL3P61236 119 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 SERF2P84101 59 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 HTD2P86397 168 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ROM1Q03395 351 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 SHBQ15464 509 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 SLC9A3R2Q15599 337 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 VAMP3Q15836 100 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 HIST3H3Q16695 136 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 GLYATL3Q5SZD4 288 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TPTE2P1Q5T6R2 138 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 FAM162BQ5T6X4 162 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 FAM90A2PQ658T7 463 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 OR4C11Q6IEV9 310 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 MRPL54Q6P161 138 aaKnown RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TMEM220Q6QAJ8 160 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 C12orf54Q6X4T0 127 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 GTF2H5Q6ZYL4 71 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF550Q7Z398 422 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TMEM25Q86YD3 366 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF440Q8IYI8 595 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 LGI3Q8N145 548 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 FBXL14Q8N1E6 418 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 SLC22A24Q8N4F4 322 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 RAB42Q8N4Z0 105 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 CYB561D1Q8N8Q1 229 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ADAD2Q8NCV1 583 aaKnown RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 NPEPL1Q8NDH3 523 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 OR4N2Q8NGD1 307 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 OR1L6Q8NGR2 347 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 OR6N2Q8NGY6 317 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 OR4K13Q8NH42 304 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 BCL2L2Q92843 193 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TMEM230Q96A57 120 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 MRGPRFQ96AM1 343 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 APH1AQ96BI3 265 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 EID2BQ96D98 161 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ALG14Q96F25 216 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 WDYHV1Q96HA8 205 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 THOC3Q96J01 351 aaKnown RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 NKX3-1Q99801 234 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 WFDC6Q9BQY6 131 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TXNDC17Q9BRA2 123 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 PSMG3Q9BT73 122 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ALG12Q9BV10 488 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 LINC00597Q9H2U6 94 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 C5orf66Q9H5L9 145 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TM7SF3Q9NS93 570 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 FBXO34Q9NWN3 711 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 HHLA2Q9UM44 414 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 LAMP3Q9UQV4 416 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 MRPS28Q9Y2Q9 187 aaKnown RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TBL2Q9Y4P3 447 aaKnown RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 OR51B2Q9Y5P1 312 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 PXMP4Q9Y6I8 212 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF780BQ9Y6R6 833 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 C5orf42Q9H799 3197 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ATG2BQ96BY7 2078 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 SZT2Q5T011 3432 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 CUL9Q8IWT3 2517 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CKAP5Q14008 2032 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 A0A0A6YYD5 115 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 NPIPA5A0A0B4J1W7 369 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 A0A0D9SEW6 157 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 A0A0G2JN53 185 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 NKX2-6A6NCS4 301 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CRYM-AS1A6NIL9 109 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 VSTM2BA6NLU5 285 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 NPIPA5E9PKD4 350 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 C17orf112F2Z3M2 114 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 NPIPA3F8WFD2 350 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 G3V4G9 280 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 RBFOX2O43251 390 aaKnown RBP eCLIP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 OR7C2O60412 319 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SMPD2O60906 423 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 NPIPB7O75200 414 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 KBTBD11O94819 623 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 LYPD3O95274 346 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CLDN7O95471 211 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 C1orf105O95561 183 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 RENP00797 406 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 MT-ND6P03923 174 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 THY1P04216 161 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 HIST1H1CP16403 213 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ALOX5APP20292 161 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 DRD1P21728 446 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PPP1CCP36873 323 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ACAA2P42765 397 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ID4P47928 161 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 REG1BP48304 166 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SOX2P48431 317 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 DNASE1L1P49184 302 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SPINT3P49223 89 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PRLHRP49683 370 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 TAS2R30P59541 319 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SNRPD1P62314 119 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 TBPL1P62380 186 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 RPS24P62847 133 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SUPT4H1P63272 117 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms