RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ZNF596Q8TC21 504 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 NEK7Q8TDX7 302 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 DPCDQ9BVM2 203 aaPredicted RBP13.08□□□□□ -0.32
COL1A1-205ENST00000476387 IFT22Q9H7X7 185 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 BLOC1S6Q9UL45 172 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 MEGF11A6BM72 1044 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 FAM172BPA6NC97 362 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 PIN1P1O15428 100 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 ATP6V1G2O95670 118 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 HSMCR30P0CW71 290 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 HTR1DP28221 377 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 IRF3Q14653 427 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 ACSM3Q53FZ2 586 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 RBM48Q5RL73 367 aaKnown RBP13.07□□□□□ -0.32
COL1A1-205ENST00000476387 ATAD3CQ5T2N8 411 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 Q6ZTK2 550 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 DYNAPQ8N1N2 210 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 ABHD12Q8N2K0 398 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 OR2T6Q8NHC8 308 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 PIFOQ8TCI5 191 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 NPFFR1Q9GZQ6 430 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 NCOR1P1Q9H4R4 102 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 DUSP21Q9H596 190 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
COL1A1-205ENST00000476387 KBTBD11-OT1A0A1B0GTJ5 212 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 A0A1W2PP11 408 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 F2RL2O00254 374 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 TOR1AO14656 332 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 CSF1P09603 554 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 CRHBPP24387 322 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 NFYBP25208 207 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 ARHGDIBP52566 201 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 PAX5Q02548 391 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 GPR50Q13585 617 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 RSBN1Q5VWQ0 802 aaPredicted RBP13.06□□□□□ -0.32
COL1A1-205ENST00000476387 LIPKQ5VXJ0 399 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 BAIAP2L2Q6UXY1 529 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 PRSS48Q7RTY5 328 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 OR4P4Q8NGL7 312 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 OR13A1Q8NGR1 328 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 PLPPR1Q8TBJ4 325 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 MRPS24Q96EL2 167 aaKnown RBP13.06□□□□□ -0.32
COL1A1-205ENST00000476387 UQCC2Q9BRT2 126 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 SPACA1Q9HBV2 294 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 CALYQ9NYX4 217 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 PITPNC1Q9UKF7 332 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 RAB26Q9ULW5 256 aa13.06□□□□□ -0.32
COL1A1-205ENST00000476387 TET2Q6N021 2002 aaPredicted RBP13.06□□□□□ -0.32
COL1A1-205ENST00000476387 TMEM30CPA0ZSE6 113 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 CRTAPO75718 401 aaPredicted RBP13.05□□□□□ -0.32
COL1A1-205ENST00000476387 IL1AP01583 271 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 CD34P28906 385 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 GDNFP39905 211 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 VHLP40337 213 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 INSL4Q14641 139 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 C17orf58Q2M2W7 97 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 HSD17B12Q53GQ0 312 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 LDLRAD2Q5SZI1 272 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 CEACAM19Q7Z692 300 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 FAM110DQ8TAY7 271 aaPredicted RBP13.05□□□□□ -0.32
COL1A1-205ENST00000476387 MRGPRDQ8TDS7 321 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 CFHR4Q92496 578 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 PHYHIPQ92561 330 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 CREB3L1Q96BA8 519 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 KIRREL1Q96J84 757 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 ZNF286AQ9HBT8 521 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 ZNF581Q9P0T4 197 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 DPM3Q9P2X0 92 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 TCF19Q9Y242 345 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 SIGLEC9Q9Y336 463 aa13.05□□□□□ -0.32
COL1A1-205ENST00000476387 CHST1O43916 411 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 MGMTP16455 207 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 CEACAM3P40198 252 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 RAB13P51153 203 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 DYNLT3P51808 116 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 PRRX1P54821 245 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 TRAM1Q15629 374 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 GLT8D1Q68CQ7 371 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 UNQ9370/PRO34162Q6UXP9 181 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 KLHDC1Q8N7A1 406 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 SELENOIQ9C0D9 397 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 CST11Q9H112 138 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 BANF2Q9H503 90 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 IDI2-AS1Q9NZ38 188 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 GHRLQ9UBU3 117 aa13.04□□□□□ -0.32
COL1A1-205ENST00000476387 PRKDCP78527 4128 aaKnown RBP13.03□□□□□ -0.32
COL1A1-205ENST00000476387 A0A087X0M5 115 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 A0A1B0GX30 115 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 LEUTXA8MZ59 168 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 MCRIP1C9JLW8 97 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 H3BUI4 141 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 UBBP0CG47 229 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 PSMA1P25786 263 aaKnown RBP13.03□□□□□ -0.32
COL1A1-205ENST00000476387 SSTR5P35346 364 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 MLLT11Q13015 90 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-205ENST00000476387 TPBGQ13641 420 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 RBM39Q14498 530 aaKnown RBP13.03□□□□□ -0.32
COL1A1-205ENST00000476387 LTC4SQ16873 150 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms