RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 GABARAPO95166 117 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 IFNA2P01563 188 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 IL1AP01583 271 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 RAB6AP20340 208 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 CHATP28329 748 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 GLP1RP43220 463 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 GPR107Q5VW38 600 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 FAM89BQ8N5H3 189 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 PTX4Q96A99 478 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 VBP1P61758 197 aa24.21■■□□□ 1.47
HOXB3-208ENST00000476342 NCS1P62166 190 aa24.21■■□□□ 1.47
HOXB3-208ENST00000476342 SLC16A12Q6ZSM3 486 aa24.21■■□□□ 1.47
HOXB3-208ENST00000476342 OR56B1Q8NGI3 324 aa24.21■■□□□ 1.47
HOXB3-208ENST00000476342 TNFRSF14Q92956 283 aa24.21■■□□□ 1.47
HOXB3-208ENST00000476342 HEXA-AS1Q9H8Q6 139 aa24.21■■□□□ 1.47
HOXB3-208ENST00000476342 ZNF69Q9UC07 566 aa24.21■■□□□ 1.47
HOXB3-208ENST00000476342 A0A0A6YYD4 124 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 IGHV1-69DA0A0B4J2H0 117 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 ZNF729A6NN14 1252 aaPredicted RBP24.2■■□□□ 1.46
HOXB3-208ENST00000476342 CLPXO76031 633 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 IGHV1-69P01742 117 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 IDNKQ5T6J7 187 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 BRD3OSQ6XYD6 125 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 ZNF497Q6ZNH5 498 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 PDZD9Q8IXQ8 264 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 PLEKHJ1Q9NW61 149 aa24.2■■□□□ 1.46
HOXB3-208ENST00000476342 CUBNO60494 3623 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 UBE2QL1A1L167 161 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 RNASEK-C17orf49H0YIS7 233 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 IGHV1-8P0DP01 117 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 RPS19P39019 145 aaKnown RBP24.19■■□□□ 1.46
HOXB3-208ENST00000476342 SERPINB10P48595 397 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 VEGFCP49767 419 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 DLX1P56177 255 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 SCAND1P57086 179 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 ZNF782Q6ZMW2 699 aaPredicted RBP24.19■■□□□ 1.46
HOXB3-208ENST00000476342 C9orf139Q6ZV77 190 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 C6orf201Q7Z4U5 140 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 C22orf15Q8WYQ4 148 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 JMJD1CQ15652 2540 aa24.19■■□□□ 1.46
HOXB3-208ENST00000476342 METTL21EPA6NDL7 271 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 SOCS1O15524 211 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 UBE2E1P51965 193 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 PLA2G7Q13093 441 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 KLRD1Q13241 179 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 OR13A1Q8NGR1 328 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 NAA50Q9GZZ1 169 aaKnown RBP24.18■■□□□ 1.46
HOXB3-208ENST00000476342 OCEL1Q9H607 264 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 EFNB2P52799 333 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 PRB3Q04118 309 aaPredicted RBP24.18■■□□□ 1.46
HOXB3-208ENST00000476342 CTF1Q16619 201 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 SULT4A1Q9BR01 284 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 HSF4Q9ULV5 492 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 SESN1Q9Y6P5 492 aa24.18■■□□□ 1.46
HOXB3-208ENST00000476342 MT-ND4P03905 459 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 SNRPBP14678 240 aaKnown RBP24.17■■□□□ 1.46
HOXB3-208ENST00000476342 RUSC1-AS1Q66K80 236 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 HEPN1Q6WQI6 88 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 Q6ZTK2 550 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 GAPTQ8N292 157 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 OR13D1Q8NGV5 346 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 LGALS14Q8TCE9 139 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 MRGPRDQ8TDS7 321 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 FAAP24Q9BTP7 215 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 TRAPPC2LQ9UL33 140 aa24.17■■□□□ 1.46
HOXB3-208ENST00000476342 KBTBD11-OT1A0A1B0GTJ5 212 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 GZMHP20718 246 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 CDK2P24941 298 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 OR52W1Q6IF63 320 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 ZNF418Q8TF45 676 aaPredicted RBP24.16■■□□□ 1.46
HOXB3-208ENST00000476342 SLC6A7Q99884 636 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 SUCNR1Q9BXA5 334 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 CALYQ9NYX4 217 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 ETV7Q9Y603 341 aa24.16■■□□□ 1.46
HOXB3-208ENST00000476342 FOXI3A8MTJ6 420 aaPredicted RBP24.15■■□□□ 1.46
HOXB3-208ENST00000476342 PAHP00439 452 aa24.15■■□□□ 1.46
HOXB3-208ENST00000476342 C17orf58Q2M2W7 97 aa24.15■■□□□ 1.46
HOXB3-208ENST00000476342 HCP5Q6MZN7 132 aa24.15■■□□□ 1.46
HOXB3-208ENST00000476342 CLVS1Q8IUQ0 354 aaPredicted RBP24.15■■□□□ 1.46
HOXB3-208ENST00000476342 CCDC107Q8WV48 283 aa24.15■■□□□ 1.46
HOXB3-208ENST00000476342 DYRK2Q92630 601 aa24.15■■□□□ 1.46
HOXB3-208ENST00000476342 SLC25A46Q96AG3 418 aa24.15■■□□□ 1.46
HOXB3-208ENST00000476342 ABRACLQ9P1F3 81 aa24.15■■□□□ 1.46
HOXB3-208ENST00000476342 CGB3P0DN86 165 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 CGB7P0DN87 165 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 COX7A1P24310 79 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 TMEM50BP56557 158 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 PRAMEF5Q5TYX0 476 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 USP43Q70EL4 1123 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 BCL6BQ8N143 479 aaPredicted RBP24.14■■□□□ 1.45
HOXB3-208ENST00000476342 OR10R2Q8NGX6 335 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 OR4K15Q8NH41 348 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 ARHGAP5-AS1Q96IT6 56 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 ATG5Q9H1Y0 275 aa24.14■■□□□ 1.45
HOXB3-208ENST00000476342 TRAV39A0A0B4J263 110 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 NPFFO15130 113 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 OMGP23515 440 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 C6orf183Q5T699 404 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 TRAT1Q6PIZ9 186 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 PNKDQ8N490 385 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms