RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CALYQ9NYX4 217 aa17.05■□□□□ 0.32
LIME1-204ENST00000476183 TPRKBQ9Y3C4 175 aa17.05■□□□□ 0.32
LIME1-204ENST00000476183 A0A087X0M5 115 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 A0A1B0GX30 115 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 GTF2F2P13984 249 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 MAPK3P27361 379 aaPredicted RBP17.04■□□□□ 0.32
LIME1-204ENST00000476183 HTR1DP28221 377 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 GABRA5P31644 462 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 DYNLT3P51808 116 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 MED22Q15528 200 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 MPV17LQ2QL34 196 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 LIAT1Q6ZQX7 453 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 LINC00596Q86U02 117 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 TMEM219Q86XT9 240 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 CDH26Q8IXH8 852 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 MRGPRDQ8TDS7 321 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 LINC00574Q9H8X3 128 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 RAB18Q9NP72 206 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 ABCB10Q9NRK6 738 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 FBLN5Q9UBX5 448 aa17.04■□□□□ 0.32
LIME1-204ENST00000476183 CRHBPP24387 322 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 KIR2DS4P43632 304 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 GPR176Q14439 515 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 ATAD3CQ5T2N8 411 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 AWAT2Q6E213 333 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 MS4A15Q8N5U1 240 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 ZNF565Q8N9K5 539 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 ZNF596Q8TC21 504 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 THRSPQ92748 146 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 PCDHB16Q9NRJ7 776 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 DPM3Q9P2X0 92 aa17.03■□□□□ 0.32
LIME1-204ENST00000476183 NPIPB11E5RHQ5 1161 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 RGS10O43665 173 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 SC5DO75845 299 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 IL1AP01583 271 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 NFYBP25208 207 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 HLA-DRB5Q30154 266 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 LIPKQ5VXJ0 399 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 LRRTM1Q86UE6 522 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 NKAIN3Q8N8D7 197 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 TMEM104Q8NE00 496 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 OR4C13Q8NGP0 309 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 RFESDQ8TAC1 157 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 CYYR1Q96J86 154 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 BANF2Q9H503 90 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 RANBP3Q9H6Z4 567 aaPredicted RBP17.02■□□□□ 0.32
LIME1-204ENST00000476183 IDI2-AS1Q9NZ38 188 aa17.02■□□□□ 0.32
LIME1-204ENST00000476183 FAM90A22PA8MWA6 464 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 F2RL2O00254 374 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 ATP6V1G2O95670 118 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 SSTR5P35346 364 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 HSPA13P48723 471 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 EFNB2P52799 333 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 GPR50Q13585 617 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 UFD1Q92890 307 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 LEAP2Q969E1 77 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 CNBD2Q96M20 576 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 UQCC2Q9BRT2 126 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 NPFFR1Q9GZQ6 430 aa17.01■□□□□ 0.31
LIME1-204ENST00000476183 RCC2Q9P258 522 aaKnown RBP17.01■□□□□ 0.31
LIME1-204ENST00000476183 TMEM30CPA0ZSE6 113 aa17■□□□□ 0.31
LIME1-204ENST00000476183 LY6LH3BQJ8 138 aa17■□□□□ 0.31
LIME1-204ENST00000476183 BUB1B-PAK6H3BSN5 160 aa17■□□□□ 0.31
LIME1-204ENST00000476183 TOR1AO14656 332 aa17■□□□□ 0.31
LIME1-204ENST00000476183 IGHV3-7P01780 117 aa17■□□□□ 0.31
LIME1-204ENST00000476183 VHLP40337 213 aa17■□□□□ 0.31
LIME1-204ENST00000476183 MAP2K4P45985 399 aa17■□□□□ 0.31
LIME1-204ENST00000476183 LTC4SQ16873 150 aa17■□□□□ 0.31
LIME1-204ENST00000476183 FBLN7Q53RD9 439 aa17■□□□□ 0.31
LIME1-204ENST00000476183 CEACAM19Q7Z692 300 aa17■□□□□ 0.31
LIME1-204ENST00000476183 MRPS24Q96EL2 167 aaKnown RBP17■□□□□ 0.31
LIME1-204ENST00000476183 CCDC90BQ9GZT6 254 aa17■□□□□ 0.31
LIME1-204ENST00000476183 ZNF702PQ9H963 129 aa17■□□□□ 0.31
LIME1-204ENST00000476183 TCF7L1Q9HCS4 588 aa17■□□□□ 0.31
LIME1-204ENST00000476183 LEUTXA8MZ59 168 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 HSMCR30P0CW71 290 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 MGMTP16455 207 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 CD24P25063 80 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 PRRX1P54821 245 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 TPBGQ13641 420 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 RBM39Q14498 530 aaKnown RBP16.99■□□□□ 0.31
LIME1-204ENST00000476183 RBM48Q5RL73 367 aaKnown RBP16.99■□□□□ 0.31
LIME1-204ENST00000476183 TPTE2P1Q5T6R2 138 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 TREML4Q6UXN2 200 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 ZNF497Q6ZNH5 498 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 PRSS48Q7RTY5 328 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 OR9G1Q8NH87 305 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 CCDC107Q8WV48 283 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 PHYHIPQ92561 330 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 TMEM203Q969S6 136 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 Q96M66 194 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 SELENOIQ9C0D9 397 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 PITPNC1Q9UKF7 332 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 MEGF8Q7Z7M0 2845 aa16.99■□□□□ 0.31
LIME1-204ENST00000476183 C15orf65H3BRN8 121 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 CRTAPO75718 401 aaPredicted RBP16.98■□□□□ 0.31
LIME1-204ENST00000476183 MT-ND4P03905 459 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 UCHL1P09936 223 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 RPS25P62851 125 aaKnown RBP16.98■□□□□ 0.31
LIME1-204ENST00000476183 HABP2Q14520 560 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms