RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CD33P20138 364 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 RAB3AP20336 220 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 CEACAM3P40198 252 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 RPS11P62280 158 aaKnown RBP eCLIP5.55□□□□□ -1.52
HDAC3-207ENST00000475549 EGFEM1PQ0D2K5 195 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 DOC2BQ14184 412 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 HNF4GQ14541 408 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 LTC4SQ16873 150 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 PAN3Q58A45 887 aaKnown RBP5.55□□□□□ -1.52
HDAC3-207ENST00000475549 ZFP1Q6P2D0 407 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 ETV3LQ6ZN32 361 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 SATL1Q86VE3 508 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 OSR2Q8N2R0 312 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 C5orf56Q8N8D9 126 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 LINC00482Q8N8I6 264 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 SUMF2Q8NBJ7 301 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF485Q8NCK3 441 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 OR13C5Q8NGS8 318 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 TNFAIP8L1Q8WVP5 186 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 CREB3L1Q96BA8 519 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 AKR1E2Q96JD6 320 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 Q96MT0 163 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 DPCDQ9BVM2 203 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-207ENST00000475549 JAM3Q9BX67 310 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 BARHL1Q9BZE3 327 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 IFT22Q9H7X7 185 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 S100A14Q9HCY8 104 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 FGF20Q9NP95 211 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-207ENST00000475549 PLSCR3Q9NRY6 295 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 IDI2-AS1Q9NZ38 188 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 CLEC2DQ9UHP7 191 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 LINC00527Q9UJ94 153 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF281Q9Y2X9 895 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 RPL36Q9Y3U8 105 aaKnown RBP5.55□□□□□ -1.52
HDAC3-207ENST00000475549 PCDHGB5Q9Y5G0 923 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 ORC6Q9Y5N6 252 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 PLXNB1O43157 2135 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 A0A1W2PP11 408 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 SNTNA6NMZ2 147 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF736B4DX44 427 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 H3BUI4 141 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 M0QZK8 103 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 GEMIN2O14893 280 aaKnown RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 OGG1O15527 345 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 MPZL2O60487 215 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 HTR3BO95264 441 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 IGKV1D-33P01593 117 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 IGKV1-33P01594 117 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 RPSAP08865 295 aaKnown RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 CCDC159P0C7I6 412 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 PF4V1P10720 104 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 IGFBP3P17936 291 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 C21orf33P30042 268 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 HOXD3P31249 432 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 MNDAP41218 407 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 GLP1RP43220 463 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 GNG10P50151 68 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF134P52741 427 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 GBX2P52951 348 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 MADCAM1Q13477 382 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 EBI3Q14213 229 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 IL13RA2Q14627 380 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 RSU1Q15404 277 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 CCDC58Q4VC31 144 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 NHLRC3Q5JS37 347 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 C9orf152Q5JTZ5 239 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 CCDC144NLQ6NUI1 221 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 RPL22L1Q6P5R6 122 aaKnown RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 C5orf24Q7Z6I8 188 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 MRPL41Q8IXM3 137 aaKnown RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 Q8N6K4 173 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 UBALD1Q8TB05 177 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 TSEN15Q8WW01 171 aaKnown RBP5.54□□□□□ -1.52
HDAC3-207ENST00000475549 ST6GALNAC6Q969X2 333 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 TMEM106AQ96A25 262 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 RPEQ96AT9 228 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 C9orf16Q9BUW7 83 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 BABAM2Q9NXR7 383 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 ST3GAL6Q9Y274 331 aa5.54□□□□□ -1.52
HDAC3-207ENST00000475549 TENM3Q9P273 2699 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 TRAV8-7A0A075B6U6 113 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 IGHV3-72A0A0B4J1Y9 119 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 IGHV1-3A0A0C4DH29 117 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 TRBV5-5A0A0J9YX44 114 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 A0A1W2PPK0 400 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 PSMB11A5LHX3 300 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 SLC31A2O15432 143 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 GPX5O75715 221 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 IGHG2P01859 326 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 MT-ND4P03905 459 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 TMEM11P17152 192 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF93P35789 620 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 VHLP40337 213 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 REG1BP48304 166 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 THBS3P49746 956 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 RBM11P57052 281 aaKnown RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 RPL23AP62750 156 aaKnown RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 SLC35A2P78381 396 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 MRPL28Q13084 256 aaKnown RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 KLHL22Q53GT1 634 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms