RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 METTL8Q9H825 291 aaKnown RBP11.28□□□□□ -0.6
ATG9A-220ENST00000475339 C19orf12Q9NSK7 152 aa11.28□□□□□ -0.6
ATG9A-220ENST00000475339 TRAV8-7A0A075B6U6 113 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 hCG_1809904A0A1W2PP81 198 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 A0A1W2PPE2 198 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 A0A1W2PR64 198 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 A0A1W2PRV1 198 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 DENRO43583 198 aaKnown RBP11.27□□□□□ -0.61
ATG9A-220ENST00000475339 GPX5O75715 221 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 PTGFRP43088 359 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 UBE2E1P51965 193 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 DGCR2P98153 550 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 SCN1BQ07699 218 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
ATG9A-220ENST00000475339 GPR50Q13585 617 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 TBCEQ15813 527 aaPredicted RBP11.27□□□□□ -0.61
ATG9A-220ENST00000475339 ACSM3Q53FZ2 586 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 NCR3LG1Q68D85 454 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 Q6ZS46 218 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 ZNF367Q7RTV3 350 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 SVOPQ8N4V2 548 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 NKAIN3Q8N8D7 197 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 OR10K1Q8NGX5 313 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 AJUBAQ96IF1 538 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 NR1H4Q96RI1 486 aaPredicted RBP11.27□□□□□ -0.61
ATG9A-220ENST00000475339 CHST6Q9GZX3 395 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 METTL9Q9H1A3 318 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
ATG9A-220ENST00000475339 PCDHB16Q9NRJ7 776 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 ING4Q9UNL4 249 aa11.27□□□□□ -0.61
ATG9A-220ENST00000475339 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 MAGEA13PA6NCF6 341 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 DEGS1O15121 323 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 ZNF737O75373 536 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 HTR3BO95264 441 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 OR2H2O95918 312 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 CSTBP04080 98 aaKnown RBP11.26□□□□□ -0.61
ATG9A-220ENST00000475339 PSMA1P25786 263 aaKnown RBP11.26□□□□□ -0.61
ATG9A-220ENST00000475339 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 CEACAM19Q7Z692 300 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 CHST4Q8NCG5 386 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 TMEM203Q969S6 136 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 MGLLQ99685 303 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 ISYNA1Q9NPH2 558 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
ATG9A-220ENST00000475339 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 hADV38S2A0JD32 116 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 FUOMA2VDF0 154 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 MGST3O14880 152 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 RRP9O43818 475 aaKnown RBP11.25□□□□□ -0.61
ATG9A-220ENST00000475339 MRPS14O60783 128 aaKnown RBP11.25□□□□□ -0.61
ATG9A-220ENST00000475339 ZNF780AO75290 641 aaPredicted RBP11.25□□□□□ -0.61
ATG9A-220ENST00000475339 CDRT1O95170 752 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 SERPINA2P20848 420 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 TPBGQ13641 420 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 IL13RA2Q14627 380 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 INSL4Q14641 139 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 TRAM1Q15629 374 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 SLC22A6Q4U2R8 563 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 HSD17B12Q53GQ0 312 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 AWAT2Q6E213 333 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 ELP2Q6IA86 826 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 LIAT1Q6ZQX7 453 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 TRAPPC6BQ86SZ2 158 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 MUL1Q969V5 352 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 YTHDF1Q9BYJ9 559 aaKnown RBP11.25□□□□□ -0.61
ATG9A-220ENST00000475339 MEGF9Q9H1U4 602 aa11.25□□□□□ -0.61
ATG9A-220ENST00000475339 MRPS28Q9Y2Q9 187 aaKnown RBP11.25□□□□□ -0.61
ATG9A-220ENST00000475339 HSPB6O14558 160 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 PSPNO60542 156 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 CCL3L1P16619 93 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 CPEP16870 476 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 OR3A1P47881 315 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 P2RX3P56373 397 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 RPS25P62851 125 aaKnown RBP11.24□□□□□ -0.61
ATG9A-220ENST00000475339 MEF2CQ06413 473 aaPredicted RBP11.24□□□□□ -0.61
ATG9A-220ENST00000475339 GPR176Q14439 515 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 ZNF273Q14593 569 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 AANATQ16613 207 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 PIGYQ3MUY2 71 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 PAN3Q58A45 887 aaKnown RBP11.24□□□□□ -0.61
ATG9A-220ENST00000475339 FAM27D1Q5T7N8 215 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 UNQ9370/PRO34162Q6UXP9 181 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 CDH26Q8IXH8 852 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 MRPL41Q8IXM3 137 aaKnown RBP11.24□□□□□ -0.61
ATG9A-220ENST00000475339 OSR2Q8N2R0 312 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 PHYHIPQ92561 330 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 PRR25Q96S07 402 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 IL36GQ9NZH8 169 aa11.24□□□□□ -0.61
ATG9A-220ENST00000475339 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
ATG9A-220ENST00000475339 MEX3AA1L020 520 aaKnown RBP11.23□□□□□ -0.61
ATG9A-220ENST00000475339 SLC33A1O00400 549 aaPredicted RBP11.23□□□□□ -0.61
ATG9A-220ENST00000475339 ARL6IP5O75915 188 aa11.23□□□□□ -0.61
ATG9A-220ENST00000475339 GTF2F2P13984 249 aa11.23□□□□□ -0.61
ATG9A-220ENST00000475339 ERVFRD-1P60508 538 aa11.23□□□□□ -0.61
ATG9A-220ENST00000475339 ARSJQ5FYB0 599 aaPredicted RBP11.23□□□□□ -0.61
ATG9A-220ENST00000475339 GLT8D1Q68CQ7 371 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms