RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 RAB18Q9NP72 206 aa19.42■□□□□ 0.7
CPNE1-223ENST00000475146 CALYQ9NYX4 217 aa19.42■□□□□ 0.7
CPNE1-223ENST00000475146 BLOC1S6Q9UL45 172 aa19.42■□□□□ 0.7
CPNE1-223ENST00000475146 RAB13P51153 203 aa19.41■□□□□ 0.7
CPNE1-223ENST00000475146 OR4P4Q8NGL7 312 aa19.41■□□□□ 0.7
CPNE1-223ENST00000475146 PIFOQ8TCI5 191 aa19.41■□□□□ 0.7
CPNE1-223ENST00000475146 TMEM203Q969S6 136 aa19.41■□□□□ 0.7
CPNE1-223ENST00000475146 UQCC2Q9BRT2 126 aa19.41■□□□□ 0.7
CPNE1-223ENST00000475146 BANF2Q9H503 90 aa19.41■□□□□ 0.7
CPNE1-223ENST00000475146 ZNF286AQ9HBT8 521 aa19.41■□□□□ 0.7
CPNE1-223ENST00000475146 TRAV39A0A0B4J263 110 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 TOR1AO14656 332 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 CRTAPO75718 401 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-223ENST00000475146 TSPAN9O75954 239 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 CD34P28906 385 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 MAP2K4P45985 399 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 PAX5Q02548 391 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 SRSF4Q08170 494 aaKnown RBP19.4■□□□□ 0.7
CPNE1-223ENST00000475146 HSD17B12Q53GQ0 312 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 BRICD5Q6PL45 260 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 LIAT1Q6ZQX7 453 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 LYPD6Q86Y78 171 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 MRPS24Q96EL2 167 aaKnown RBP19.4■□□□□ 0.7
CPNE1-223ENST00000475146 C16orf95Q9H693 158 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 TCF19Q9Y242 345 aa19.4■□□□□ 0.7
CPNE1-223ENST00000475146 TMEM30CPA0ZSE6 113 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 F2RL2O00254 374 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 IL1AP01583 271 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 MGMTP16455 207 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 JUNBP17275 347 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-223ENST00000475146 MLLT11Q13015 90 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-223ENST00000475146 LTC4SQ16873 150 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 SLC35E4Q6ICL7 350 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 OR4C13Q8NGP0 309 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 PHYHIPQ92561 330 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 KIRREL1Q96J84 757 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 SELENOIQ9C0D9 397 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 SPACA1Q9HBV2 294 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 ISYNA1Q9NPH2 558 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 DPM3Q9P2X0 92 aa19.39■□□□□ 0.69
CPNE1-223ENST00000475146 CHST1O43916 411 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 CGB3P0DN86 165 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 CGB7P0DN87 165 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 GABRA5P31644 462 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 GP2P55259 537 aaKnown RBP19.38■□□□□ 0.69
CPNE1-223ENST00000475146 RPS25P62851 125 aaKnown RBP19.38■□□□□ 0.69
CPNE1-223ENST00000475146 TPBGQ13641 420 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 RBM39Q14498 530 aaKnown RBP19.38■□□□□ 0.69
CPNE1-223ENST00000475146 GLT8D1Q68CQ7 371 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 LRRTM1Q86UE6 522 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 TMEM104Q8NE00 496 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 RFESDQ8TAC1 157 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 NPFFR1Q9GZQ6 430 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 IDI2-AS1Q9NZ38 188 aa19.38■□□□□ 0.69
CPNE1-223ENST00000475146 A0A087X0M5 115 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 A0A1B0GX30 115 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 SC5DO75845 299 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 SRMP19623 302 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 SSTR5P35346 364 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 PRRX1P54821 245 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 PROK1P58294 105 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 HLA-DRB5Q30154 266 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 TMEM219Q86XT9 240 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 FAM46BQ96A09 425 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 MGLLQ99685 303 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 GHRLQ9UBU3 117 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 PITPNC1Q9UKF7 332 aa19.37■□□□□ 0.69
CPNE1-223ENST00000475146 LEUTXA8MZ59 168 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 MCRIP1C9JLW8 97 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 IGLV1-47P01700 117 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 UCHL1P09936 223 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 CPEP16870 476 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 DYNLT3P51808 116 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 TRAM1Q15629 374 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 TBCEQ15813 527 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-223ENST00000475146 UTF1Q5T230 341 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 RAB12Q6IQ22 244 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 OR9G1Q8NH87 305 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 CCDC107Q8WV48 283 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 LEAP2Q969E1 77 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 CREB3L1Q96BA8 519 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 CST11Q9H112 138 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 Q9H521 79 aa19.36■□□□□ 0.69
CPNE1-223ENST00000475146 RANBP3Q9H6Z4 567 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-223ENST00000475146 RCC2Q9P258 522 aaKnown RBP19.36■□□□□ 0.69
CPNE1-223ENST00000475146 A6NDX4 124 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 AIPO00170 330 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 IGHV3-7P01780 117 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 PSMA1P25786 263 aaKnown RBP19.35■□□□□ 0.69
CPNE1-223ENST00000475146 CEACAM3P40198 252 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 CCBE1Q6UXH8 406 aaPredicted RBP19.35■□□□□ 0.69
CPNE1-223ENST00000475146 ZNF367Q7RTV3 350 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 Q96M66 194 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 LINC00574Q9H8X3 128 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 SIGLEC9Q9Y336 463 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 PEX16Q9Y5Y5 336 aa19.35■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A10PA6NDY2 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A18PA6NE21 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A16PA6NEW6 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A20PA6NIJ5 464 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms