RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SLC33A1O00400 549 aaPredicted RBP11.04□□□□□ -0.64
CCDC78-209ENST00000474647 RAMP3O60896 148 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 SULT1C4O75897 302 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 KDM4BO94953 1096 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 IGKV1D-33P01593 117 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 IGKV1-33P01594 117 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 C17orf58Q2M2W7 97 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 C6orf141Q5SZD1 244 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 THNSL2Q86YJ6 484 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 SPSB1Q96BD6 273 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 RNFT2Q96EX2 444 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 RAX2Q96IS3 184 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 ASCL2Q99929 193 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 COMMD4Q9H0A8 199 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 MRPS18AQ9NVS2 196 aaKnown RBP11.04□□□□□ -0.64
CCDC78-209ENST00000474647 OR6C3Q9NZP0 311 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 EXOGQ9Y2C4 368 aaKnown RBP11.04□□□□□ -0.64
CCDC78-209ENST00000474647 SORL1Q92673 2214 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 DNAH7Q8WXX0 4024 aa11.04□□□□□ -0.64
CCDC78-209ENST00000474647 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 A0A1W2PPI3 338 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A18PA6NE21 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A16PA6NEW6 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A20PA6NIJ5 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A12PA8MX19 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A5PA8MXJ8 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 J3QR06 171 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 CCL24O00175 119 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 CSN2P05814 226 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A15PP0C7V4 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A13PP0C7W8 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A14PP0C7W9 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 FAM90A24PP0C7X0 464 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 RAB40BQ12829 278 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 MADCAM1Q13477 382 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 DIAPH2-AS1Q14236 149 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 KLHL22Q53GT1 634 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 TMEM244Q5VVB8 128 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 UTS2BQ765I0 119 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 STPG2Q8N412 459 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 COMMD1Q8N668 190 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 CHST4Q8NCG5 386 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 OR13C3Q8NGS6 347 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 OR13C9Q8NGT0 318 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 LGALS12Q96DT0 336 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 AMBNQ9NP70 447 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 CALYQ9NYX4 217 aa11.03□□□□□ -0.64
CCDC78-209ENST00000474647 CNOT2Q9NZN8 540 aaKnown RBP11.03□□□□□ -0.64
CCDC78-209ENST00000474647 MEIKINA0A087WXM9 373 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 J3QRE1 110 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 DEGS1O15121 323 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 FGF16O43320 207 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 ECI1P42126 302 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 GP2P55259 537 aaKnown RBP11.02□□□□□ -0.65
CCDC78-209ENST00000474647 NKAPLQ5M9Q1 402 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 RBM48Q5RL73 367 aaKnown RBP11.02□□□□□ -0.65
CCDC78-209ENST00000474647 C9orf66Q5T8R8 295 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 Q6P435 159 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 LCNL1Q6ZST4 164 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 BPIFB6Q8NFQ5 453 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 OR5M8Q8NGP6 311 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 OR13A1Q8NGR1 328 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 NR1H4Q96RI1 486 aaPredicted RBP11.02□□□□□ -0.65
CCDC78-209ENST00000474647 FKBP14Q9NWM8 211 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 IDI2-AS1Q9NZ38 188 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 PSORS1C1Q9UIG5 152 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 PSG11Q9UQ72 335 aa11.02□□□□□ -0.65
CCDC78-209ENST00000474647 LSM4Q9Y4Z0 139 aaKnown RBP11.02□□□□□ -0.65
CCDC78-209ENST00000474647 DYNC2H1Q8NCM8 4307 aaKnown RBP11.01□□□□□ -0.65
CCDC78-209ENST00000474647 HUWE1Q7Z6Z7 4374 aaKnown RBP11.01□□□□□ -0.65
CCDC78-209ENST00000474647 A0A1W2PPE3 182 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 IRGMA1A4Y4 181 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 EFCAB10A6NFE3 127 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 NCBP2LA6PVI3 153 aaKnown RBP11.01□□□□□ -0.65
CCDC78-209ENST00000474647 C3orf84H3BNL1 204 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 IGHG2P01859 326 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 RPLP1P05386 114 aaKnown RBP11.01□□□□□ -0.65
CCDC78-209ENST00000474647 HCKP08631 526 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 RAB7AP51149 207 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 ZNF85Q03923 595 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 PAN3Q58A45 887 aaKnown RBP11.01□□□□□ -0.65
CCDC78-209ENST00000474647 CXorf66Q5JRM2 361 aaPredicted RBP11.01□□□□□ -0.65
CCDC78-209ENST00000474647 TEX38Q6PEX7 206 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 OR8H3Q8N146 312 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 OR51A4Q8NGJ6 313 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 OR52I1Q8NGK6 324 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 OR10X1Q8NGY0 326 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 OR2G2Q8NGZ5 317 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 OR10AC1Q8NH08 325 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 OR8U1Q8NH10 309 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 GGHQ92820 318 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 JAM3Q9BX67 310 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 FGF20Q9NP95 211 aaPredicted RBP11.01□□□□□ -0.65
CCDC78-209ENST00000474647 KIF25Q9UIL4 384 aa11.01□□□□□ -0.65
CCDC78-209ENST00000474647 IGHV3-72A0A0B4J1Y9 119 aa11□□□□□ -0.65
CCDC78-209ENST00000474647 LINC01548A6NM66 108 aa11□□□□□ -0.65
CCDC78-209ENST00000474647 SEC14L6B5MCN3 397 aa11□□□□□ -0.65
CCDC78-209ENST00000474647 AP4M1O00189 453 aa11□□□□□ -0.65
CCDC78-209ENST00000474647 HSD17B6O14756 317 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms