RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 TMEM133Q9H2Q1 129 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 TNFRSF19Q9NS68 423 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 ETAA1Q9NY74 926 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 STEAP1Q9UHE8 339 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 KBTBD11-OT1A0A1B0GTJ5 212 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 CRYBA1P05813 215 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 CD37P11049 281 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 GZMHP20718 246 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 FGF9P31371 208 aaPredicted RBP11.22□□□□□ -0.61
USF1-205ENST00000473969 PAX5Q02548 391 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 FAM189A2Q15884 450 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 TIMM50Q3ZCQ8 353 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 NKAPLQ5M9Q1 402 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 HES5Q5TA89 166 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 PRAMEF5Q5TYX0 476 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 OR10K2Q6IF99 312 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 BRICD5Q6PL45 260 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 HEPN1Q6WQI6 88 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 RTN4RL2Q86UN3 420 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 TMEM86BQ8N661 226 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 OR51D1Q8NGF3 324 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 PLPPR1Q8TBJ4 325 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 FAM216AQ8WUB2 273 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 MDFIQ99750 246 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 CHCHD6Q9BRQ6 235 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 ZNF696Q9H7X3 374 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 RAB9BQ9NP90 201 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 ESM1Q9NQ30 184 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 TXNL4BQ9NX01 149 aaKnown RBP11.22□□□□□ -0.61
USF1-205ENST00000473969 ZNF581Q9P0T4 197 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 POMT1Q9Y6A1 747 aa11.22□□□□□ -0.61
USF1-205ENST00000473969 MXRA5Q9NR99 2828 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 LOC100506127A0A0U1RQW1 187 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 CLDN34H7C241 214 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 AIPO00170 330 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 TOR1AO14656 332 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 PDCD6O75340 191 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 CA11O75493 328 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 MELTFP08582 738 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 NFYBP25208 207 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 RPS27AP62979 156 aaKnown RBP11.21□□□□□ -0.61
USF1-205ENST00000473969 TUSC1Q2TAM9 212 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 HCP5Q6MZN7 132 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 C16orf87Q6PH81 154 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 TPRA1Q86W33 373 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 LDLRAD3Q86YD5 345 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 ABHD12Q8N2K0 398 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 OR13A1Q8NGR1 328 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 MRGPRDQ8TDS7 321 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 GCDHQ92947 438 aaPredicted RBP11.21□□□□□ -0.61
USF1-205ENST00000473969 FAM3DQ96BQ1 224 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 GFI1Q99684 422 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 OR51E2Q9H255 320 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 CALYQ9NYX4 217 aa11.21□□□□□ -0.61
USF1-205ENST00000473969 RCC2Q9P258 522 aaKnown RBP11.21□□□□□ -0.61
USF1-205ENST00000473969 TBL2Q9Y4P3 447 aaKnown RBP11.21□□□□□ -0.61
USF1-205ENST00000473969 IGHV2-26A0A0B4J1V2 119 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 UBE2QL1A1L167 161 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 TMEM14DPA8MWL7 114 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 RNASE1P07998 156 aaKnown RBP11.2□□□□□ -0.62
USF1-205ENST00000473969 OMGP23515 440 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 BLVRBP30043 206 aaPredicted RBP11.2□□□□□ -0.62
USF1-205ENST00000473969 PRRX1P54821 245 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 CLDN12P56749 244 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 C2orf76Q3KRA6 126 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 TRAT1Q6PIZ9 186 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 ZNF497Q6ZNH5 498 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
USF1-205ENST00000473969 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 ZNF596Q8TC21 504 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 PLEKHJ1Q9NW61 149 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 KCNIP1Q9NZI2 227 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 RAB22AQ9UL26 194 aa11.2□□□□□ -0.62
USF1-205ENST00000473969 IFITM5A6NNB3 132 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 IL1AP01583 271 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 MT-ND4P03905 459 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 GADD45AP24522 165 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 IER3P46695 156 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 OR10A3P58181 314 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 UNC119Q13432 240 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 LTC4SQ16873 150 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 ZNF626Q68DY1 528 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 GDPGP1Q6ZNW5 385 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 BEND2Q8NDZ0 799 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 OR10A7Q8NGE5 316 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 OR56B1Q8NGI3 324 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 OR4K15Q8NH41 348 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms