RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 FOXRED1Q96CU9 486 aaPredicted RBP15.33■□□□□ 0.04
PTCD3-210ENST00000473829 MRPS24Q96EL2 167 aaKnown RBP15.33■□□□□ 0.04
PTCD3-210ENST00000473829 CLEC7AQ9BXN2 247 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 BARHL1Q9BZE3 327 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 SELENOIQ9C0D9 397 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 NCOR1P1Q9H4R4 102 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 ZNF286AQ9HBT8 521 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 NDUFB11Q9NX14 153 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 CALYQ9NYX4 217 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 TBL2Q9Y4P3 447 aaKnown RBP15.33■□□□□ 0.04
PTCD3-210ENST00000473829 KBTBD11-OT1A0A1B0GTJ5 212 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 VSIG8P0DPA2 414 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 JUNBP17275 347 aaPredicted RBP15.32■□□□□ 0.04
PTCD3-210ENST00000473829 SSTR5P35346 364 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 LRRC75BQ2VPJ9 315 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 PLA1AQ53H76 456 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 UBE2UQ5VVX9 321 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 SIGIRRQ6IA17 410 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 SLC35E4Q6ICL7 350 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 SVOPQ8N4V2 548 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 OR4P4Q8NGL7 312 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 PIFOQ8TCI5 191 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 MRGPRDQ8TDS7 321 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 KIRREL1Q96J84 757 aa15.32■□□□□ 0.04
PTCD3-210ENST00000473829 BTBD17A6NE02 478 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 SLC22A1O15245 554 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 CALRP27797 417 aaKnown RBP15.31■□□□□ 0.04
PTCD3-210ENST00000473829 RAG2P55895 527 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 UNC119Q13432 240 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 LY6EQ16553 131 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 ABHD12Q8N2K0 398 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 C3orf56Q8N813 242 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 OR5R1Q8NH85 324 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 NEK7Q8TDX7 302 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 YTHDF1Q9BYJ9 559 aaKnown RBP15.31■□□□□ 0.04
PTCD3-210ENST00000473829 SLITRK2Q9H156 845 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 GHRLQ9UBU3 117 aa15.31■□□□□ 0.04
PTCD3-210ENST00000473829 AK6Q9Y3D8 172 aaKnown RBP15.31■□□□□ 0.04
PTCD3-210ENST00000473829 SHISA3A0PJX4 238 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 TMEM30CPA0ZSE6 113 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A10PA6NDY2 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A18PA6NE21 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A16PA6NEW6 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A20PA6NIJ5 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A7PA6NKC0 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A22PA8MWA6 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A12PA8MX19 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A5PA8MXJ8 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A23PA8MXZ1 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 ARL6IP5O75915 188 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 NDUFA7O95182 113 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 MPIG6BO95866 241 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 IL1AP01583 271 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 CRYBA1P05813 215 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A15PP0C7V4 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A13PP0C7W8 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A14PP0C7W9 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 FAM90A24PP0C7X0 464 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 UBBP0CG47 229 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 HTR2CP28335 458 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 CD34P28906 385 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 RPL15P61313 204 aaKnown RBP15.3■□□□□ 0.04
PTCD3-210ENST00000473829 QRFPP83859 136 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 SSX2Q16385 188 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 AANATQ16613 207 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 OR52W1Q6IF63 320 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 RAB12Q6IQ22 244 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 CD200R1LQ6Q8B3 271 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 ZNF497Q6ZNH5 498 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 MALSU1Q96EH3 234 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 CST11Q9H112 138 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 LINC00574Q9H8X3 128 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 LRRC42Q9Y546 428 aa15.3■□□□□ 0.04
PTCD3-210ENST00000473829 A0A087X0M5 115 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 A0A1B0GX30 115 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 VGLL3A8MV65 326 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 NPIPB11E5RHQ5 1161 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 IGLV1-47P01700 117 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 NFYBP25208 207 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 RAB13P51153 203 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 P2RY14Q15391 338 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 FAM189A2Q15884 450 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 LTC4SQ16873 150 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 MINOS1Q5TGZ0 78 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 ZNF773Q6PK81 442 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 GDPGP1Q6ZNW5 385 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 ZNF565Q8N9K5 539 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 OR6M1Q8NGM8 313 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 RFESDQ8TAC1 157 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 CCDC107Q8WV48 283 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 LEAP2Q969E1 77 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 SPACA1Q9HBV2 294 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 HILPDAQ9Y5L2 63 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 PEX16Q9Y5Y5 336 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 MINOS1-NBL1R4GNA1 71 aa15.29■□□□□ 0.04
PTCD3-210ENST00000473829 TMEM14DPA8MWL7 114 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 HAX1O00165 279 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 SLC17A2O00624 439 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 IGHV3-7P01780 117 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 MT-ND4P03905 459 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms