RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 LPLP06858 475 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 GLP1RP43220 463 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 RBM39Q14498 530 aaKnown RBP12.18□□□□□ -0.46
VTI1A-203ENST00000472892 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 TMPRSS11AQ6ZMR5 421 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 SLC16A12Q6ZSM3 486 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 OR10A7Q8NGE5 316 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 PLPPR1Q8TBJ4 325 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 TMEM106AQ96A25 262 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 FAM192AQ9GZU8 254 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 IFT22Q9H7X7 185 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 TMEM138Q9NPI0 162 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 PCDHB16Q9NRJ7 776 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 IL36GQ9NZH8 169 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 ZNF281Q9Y2X9 895 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 NOTCH3Q9UM47 2321 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 IRGMA1A4Y4 181 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 EBAG9O00559 213 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 CDRT1O95170 752 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 BAG2O95816 211 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 Q6ZPA2 131 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 SUMF2Q8NBJ7 301 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 MRGPRDQ8TDS7 321 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 RPEQ96AT9 228 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 DPCDQ9BVM2 203 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-203ENST00000472892 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 ING4Q9UNL4 249 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 DIMT1Q9UNQ2 313 aaKnown RBP12.17□□□□□ -0.46
VTI1A-203ENST00000472892 ST3GAL6Q9Y274 331 aa12.17□□□□□ -0.46
VTI1A-203ENST00000472892 AMMECR1Q9Y4X0 333 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-203ENST00000472892 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 SH2D7A6NKC9 451 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-203ENST00000472892 GPX5O75715 221 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 GZMHP20718 246 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 ZNF93P35789 620 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-203ENST00000472892 PPP3R1P63098 170 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 OR52N1Q8NH53 320 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 LEAP2Q969E1 77 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 TOMM40LQ969M1 308 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 SMIM19Q96E16 107 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 NECAP2Q9NVZ3 263 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 ZNF581Q9P0T4 197 aa12.16□□□□□ -0.46
VTI1A-203ENST00000472892 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-203ENST00000472892 TRAV39A0A0B4J263 110 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 TRBV5-5A0A0J9YX44 114 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 A0A1W2PPI3 338 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 CLIC3O95833 236 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 LALBAP00709 142 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 IGHV3-7P01780 117 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 SNRNP70P08621 437 aaKnown RBP12.15□□□□□ -0.46
VTI1A-203ENST00000472892 IGFBP3P17936 291 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-203ENST00000472892 BDKRB2P30411 391 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
VTI1A-203ENST00000472892 MADCAM1Q13477 382 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 DDI2Q5TDH0 399 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 DMKNQ6E0U4 476 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-203ENST00000472892 LINC00596Q86U02 117 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 DRAM1Q8N682 238 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 OR4X2Q8NGF9 303 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 SGCDQ92629 289 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 GHSRQ92847 366 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 MYDGFQ969H8 173 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 ORAI1Q96D31 301 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 TMEM80Q96HE8 168 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 PAK1IP1Q9NWT1 392 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-203ENST00000472892 CLEC2DQ9UHP7 191 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 MOB4Q9Y3A3 225 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 EXOSC1Q9Y3B2 195 aaKnown RBP12.15□□□□□ -0.46
VTI1A-203ENST00000472892 HSPE1-MOB4S4R3N1 261 aa12.15□□□□□ -0.46
VTI1A-203ENST00000472892 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
VTI1A-203ENST00000472892 ZNF780AO75290 641 aaPredicted RBP12.14□□□□□ -0.47
VTI1A-203ENST00000472892 OR7C1O76099 320 aaPredicted RBP12.14□□□□□ -0.47
VTI1A-203ENST00000472892 CSTBP04080 98 aaKnown RBP12.14□□□□□ -0.47
VTI1A-203ENST00000472892 MYL12AP19105 171 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 SSTR5P35346 364 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 RAB7AP51149 207 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 RPS11P62280 158 aaKnown RBP eCLIP12.14□□□□□ -0.47
VTI1A-203ENST00000472892 LTC4SQ16873 150 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 TTC23Q5W5X9 447 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 C10orf99Q6UWK7 81 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 ZNF485Q8NCK3 441 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 OR56B4Q8NH76 319 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 PHF21AQ96BD5 680 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 S100A13Q99584 98 aa12.14□□□□□ -0.47
VTI1A-203ENST00000472892 TMEM30CPA0ZSE6 113 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 C15orf65H3BRN8 121 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 PF4V1P10720 104 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 GTF2F2P13984 249 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 CD33P20138 364 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 GNG10P50151 68 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 ADARB1P78563 741 aaKnown RBP12.13□□□□□ -0.47
VTI1A-203ENST00000472892 RIPK1Q13546 671 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 MPV17LQ2QL34 196 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 Q499Y3 187 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms