RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 FAAP24Q9BTP7 215 aa2.2□□□□□ -2.06
PRPF40A-208ENST00000472760 TSSK6Q9BXA6 273 aa2.2□□□□□ -2.06
PRPF40A-208ENST00000472760 FBXL15Q9H469 300 aa2.2□□□□□ -2.06
PRPF40A-208ENST00000472760 SNX24Q9Y343 169 aa2.2□□□□□ -2.06
PRPF40A-208ENST00000472760 HIVEP2P31629 2446 aa2.2□□□□□ -2.06
PRPF40A-208ENST00000472760 IGKV1D-37A0A075B6S9 117 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 GOLGA8QA0A0J9YX86 632 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 A0A1B0GU33 70 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 FADS2O95864 444 aaKnown RBP2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 CTSGP08311 255 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 AKR1C4P17516 323 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 HADHBP55084 474 aaKnown RBP2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 MMDQ15546 238 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 FAM162BQ5T6X4 162 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 OR4A5Q8NH83 315 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 DTD1Q8TEA8 209 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 MRAP2Q96G30 205 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 SERPINB11Q96P15 392 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 EBPLQ9BY08 206 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 BCL2L14Q9BZR8 327 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 CHMP5Q9NZZ3 219 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 ENPP5Q9UJA9 477 aa2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 TBL2Q9Y4P3 447 aaKnown RBP2.19□□□□□ -2.06
PRPF40A-208ENST00000472760 SDHAF1A6NFY7 115 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 YKT6O15498 198 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 EEF1E1O43324 174 aaKnown RBP2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 SGCEO43556 437 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 SH2D1AO60880 128 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 OPN1SWP03999 348 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 PSKH1P11801 424 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 EVI2BP34910 448 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 UGT2B10P36537 528 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 CST6Q15828 149 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 PYCR3Q53H96 274 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 OR10J3Q5JRS4 329 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 TCAIMQ8N3R3 496 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 SPPL2BQ8TCT7 592 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 ZCCHC13Q8WW36 166 aaKnown RBP2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 TMIGD2Q96BF3 282 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 ARL6Q9H0F7 186 aa2.18□□□□□ -2.06
PRPF40A-208ENST00000472760 MIA3Q5JRA6 1907 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 AK9Q5TCS8 1911 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 A0A1B0GTI1 187 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 A0A1W2PNM2 257 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 TMEM250H0YL14 139 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 FGF16O43320 207 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 TNFAIP8O95379 198 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 NQO2P16083 231 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 ATF1P18846 271 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 RAB2AP61019 212 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 USF2Q15853 346 aaPredicted RBP2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 TCF24Q7RTU0 167 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 NIT1Q86X76 327 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 KRTCAP2Q8N6L1 136 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 OR11G2Q8NGC1 345 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 PDCD6IPQ8WUM4 868 aaKnown RBP2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 KCTD4Q8WVF5 259 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 HIST1H2BAQ96A08 127 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 RAD51AP1Q96B01 352 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 OR8B2Q96RD0 313 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 CYTH2Q99418 400 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 B9D2Q9BPU9 175 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 PHLDA3Q9Y5J5 127 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 SDK2Q58EX2 2172 aa2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 COL5A1P20908 1838 aaPredicted RBP2.17□□□□□ -2.06
PRPF40A-208ENST00000472760 A0A1B0GX12 115 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 C3orf84H3BNL1 204 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 K7ERQ8 282 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 SULT1C2O00338 296 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 MP68P56378 58 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 OR10A3P58181 314 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 RAB31Q13636 194 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 OR4D1Q15615 310 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 C10orf91Q5T1B1 145 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 COPS6Q7L5N1 327 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 SSX7Q7RTT5 188 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 FAM19A3Q7Z5A8 133 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 PHOSPHO2Q8TCD6 241 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 CCDC127Q96BQ5 260 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 DDIT4LQ96D03 193 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 MRPL16Q9NX20 251 aaKnown RBP2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 SLC23A2Q9UGH3 650 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 RPUSD1Q9UJJ7 312 aaKnown RBP2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 URGCP-MRPS24S4R325 110 aa2.16□□□□□ -2.06
PRPF40A-208ENST00000472760 FAM25EA8MYX2 175 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 C8orf87E5RJ46 101 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 ZNF22P17026 224 aaPredicted RBP2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 MAGEA6P43360 314 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 INPP1P49441 399 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 APOFQ13790 326 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 NOXRED1Q6NXP6 359 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 TCF23Q7RTU1 214 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 TMEM25Q86YD3 366 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 MSRB3Q8IXL7 192 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 OR8K1Q8NGG5 319 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 LMX1AQ8TE12 382 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 PRSS27Q9BQR3 290 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 ALX4Q9H161 411 aaPredicted RBP2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 MMACHCQ9Y4U1 282 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms