RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 MYOZ3Q8TDC0 251 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 DDB2Q92466 427 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 ASB9Q96DX5 294 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 NSL1Q96IY1 281 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 HRASLS5Q96KN8 279 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 MNTQ99583 582 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 ZNF556Q9HAH1 456 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 GNB4Q9HAV0 340 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 NDE1Q9NXR1 346 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 CALYQ9NYX4 217 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 IDI2-AS1Q9NZ38 188 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 IGHV1-3A0A0C4DH29 117 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 ZAR1LA6NP61 321 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 I3L521 148 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 AP4M1O00189 453 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 HSPB6O14558 160 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 DEGS1O15121 323 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 SERPINA3P01011 423 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 IGHG4P01861 327 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 KRT8P05787 483 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 ELANEP08246 267 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 HCKP08631 526 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 MYF6P23409 242 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 PSMB8P28062 276 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 SSTR5P35346 364 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 POLR2IP36954 125 aaKnown RBP7.23□□□□□ -1.25
VCL-204ENST00000472585 VHLP40337 213 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 F2RL1P55085 397 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 ZP1P60852 638 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 ACTR3P61158 418 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 GNB1P62873 340 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 MADCAM1Q13477 382 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 TGIF2LXQ8IUE1 241 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 ARHGAP24Q8N264 748 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 TMEM104Q8NE00 496 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 OR2G2Q8NGZ5 317 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 PP6455Q8WZ26 134 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 ST6GALNAC6Q969X2 333 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 UTP4Q969X6 686 aaKnown RBP7.23□□□□□ -1.25
VCL-204ENST00000472585 C10orf35Q96D05 121 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 MBOAT4Q96T53 435 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 TM2D3Q9BRN9 247 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 GON7Q9BXV9 100 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 GLS2Q9UI32 602 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 ARL2BPQ9Y2Y0 163 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 PCLOQ9Y6V0 5065 aa7.23□□□□□ -1.25
VCL-204ENST00000472585 PLECQ15149 4684 aaKnown RBP7.22□□□□□ -1.25
VCL-204ENST00000472585 MEIKINA0A087WXM9 373 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 FUOMA2VDF0 154 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 TRIM64CA6NLI5 447 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 AQP12BA6NM10 295 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 NCBP2LA6PVI3 153 aaKnown RBP7.22□□□□□ -1.25
VCL-204ENST00000472585 FKBP6O75344 327 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 SULT1C4O75897 302 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 IL1AP01583 271 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 IFNA6P05013 189 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 OR2T7P0C7T2 308 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 SPNP16150 400 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 PRKACBP22694 351 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 PPIFP30405 207 aaKnown RBP7.22□□□□□ -1.25
VCL-204ENST00000472585 GLP1RP43220 463 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 RAB7AP51149 207 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 ZNF816Q0VGE8 651 aaPredicted RBP7.22□□□□□ -1.25
VCL-204ENST00000472585 RSBN1Q5VWQ0 802 aaPredicted RBP7.22□□□□□ -1.25
VCL-204ENST00000472585 MOB3BQ86TA1 216 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 ZNF429Q86V71 674 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 AQP12AQ8IXF9 295 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 OR8H3Q8N146 312 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 CCDC54Q8NEL0 328 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 OR13C9Q8NGT0 318 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 UBALD1Q8TB05 177 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 HAVCR2Q8TDQ0 301 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 MRGPRDQ8TDS7 321 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 C4orf3Q8WVX3 66 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 CYYR1Q96J86 154 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 RITA1Q96K30 269 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 OPALINQ96PE5 141 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 S1PR3Q99500 378 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 ADI1Q9BV57 179 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 PCDHB16Q9NRJ7 776 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 LIN7CQ9NUP9 197 aaKnown RBP7.22□□□□□ -1.25
VCL-204ENST00000472585 OR6C3Q9NZP0 311 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 H2AFY2Q9P0M6 372 aaPredicted RBP7.22□□□□□ -1.25
VCL-204ENST00000472585 MYRFQ9Y2G1 1151 aa7.22□□□□□ -1.25
VCL-204ENST00000472585 TCRBV3S1A0A5B6 114 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 H0YJX3 145 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 C15orf65H3BRN8 121 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 J3QRE1 110 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 HSD17B6O14756 317 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 EREGO14944 169 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 SLC31A2O15432 143 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 CYB5AP00167 134 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 MT-ND2P03891 347 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 ISG15P05161 165 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 GP9P14770 177 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 ZNF134P52741 427 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 SRSF7Q16629 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
VCL-204ENST00000472585 IZUMO1Q8IYV9 350 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 SAXO1Q8IYX7 474 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 FAM71E2Q8N5Q1 922 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms