RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 RAD51AP1Q96B01 352 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 CLDN23Q96B33 292 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 TMIGD2Q96BF3 282 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 CATSPER2Q96P56 530 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 HIGD2AQ9BW72 106 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 EBPLQ9BY08 206 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 IFT46Q9NQC8 304 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 OR5V1Q9UGF6 321 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 POFUT2Q9Y2G5 429 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 U3KQK5 164 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 DHX57Q6P158 1386 aaKnown RBP1.68□□□□□ -2.14
PTCD3-209ENST00000472044 ATAD5Q96QE3 1844 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 LCTP09848 1927 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 A0A1B0GX12 115 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 FAM25EA8MYX2 175 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 SGCEO43556 437 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 PSKH1P11801 424 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 CRABP2P29373 138 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 AQP5P55064 265 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 RAB25P57735 213 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 UBE2KP61086 200 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 ZBTB6Q15916 424 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 ELP2Q6IA86 826 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 DGAT2L6Q6ZPD8 337 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 LRRC6Q86X45 466 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 NIT1Q86X76 327 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 FER1L6-AS1Q8NA97 138 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 GATD1Q8NB37 220 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 IFT81Q8WYA0 676 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 RORBQ92753 470 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 REEP6Q96HR9 211 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 HBEGFQ99075 208 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 POMPQ9Y244 141 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 SNX24Q9Y343 169 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 TBL2Q9Y4P3 447 aaKnown RBP1.67□□□□□ -2.14
PTCD3-209ENST00000472044 KIAA0232Q92628 1395 aa1.67□□□□□ -2.14
PTCD3-209ENST00000472044 PCNX2A6NKB5 2137 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 TRAV8-2A0A0B4J237 113 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 YKT6O15498 198 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 SPNP16150 400 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 PYCR1P32322 319 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 INPP1P49441 399 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 USF2Q15853 346 aaPredicted RBP1.66□□□□□ -2.14
PTCD3-209ENST00000472044 LAIR2Q6ISS4 152 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 OLIG3Q7RTU3 272 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 KRTCAP2Q8N6L1 136 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 DTD1Q8TEA8 209 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 KCTD4Q8WVF5 259 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 SERPINB11Q96P15 392 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 PRSS27Q9BQR3 290 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 LINC00588Q9Y4M8 146 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 RAB3GAP2Q9H2M9 1393 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 NUP153P49790 1475 aaKnown RBP1.66□□□□□ -2.14
PTCD3-209ENST00000472044 CACNA1SQ13698 1873 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 ABCB11O95342 1321 aa1.66□□□□□ -2.14
PTCD3-209ENST00000472044 IGHV3OR15-7A0A075B7D8 119 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 A6NED7 52 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 C8orf87E5RJ46 101 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 J3QRE1 110 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 FGF16O43320 207 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 SH2D1AO60880 128 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 GYPCP04921 128 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 ZNF3P17036 446 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 EVI2BP34910 448 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 HSPA13P48723 471 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 OR10A3P58181 314 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 TPBGQ13641 420 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 FLOT2Q14254 428 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 OR4D1Q15615 310 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 C10orf91Q5T1B1 145 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 SPNS3Q6ZMD2 512 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 HS3ST5Q8IZT8 346 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 PGLYRP3Q96LB9 341 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 FAAP24Q9BTP7 215 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 TAPBPLQ9BX59 468 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 TSSK6Q9BXA6 273 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 ALX4Q9H161 411 aaPredicted RBP1.65□□□□□ -2.15
PTCD3-209ENST00000472044 TAS2R13Q9NYV9 303 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 ENPP5Q9UJA9 477 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 RPUSD1Q9UJJ7 312 aaKnown RBP1.65□□□□□ -2.15
PTCD3-209ENST00000472044 BTRCQ9Y297 605 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 SHANK3Q9BYB0 1731 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 DNMT1P26358 1616 aaKnown RBP1.65□□□□□ -2.15
PTCD3-209ENST00000472044 MYO9BQ13459 2157 aa1.65□□□□□ -2.15
PTCD3-209ENST00000472044 GOLGA8QA0A0J9YX86 632 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 A0A1B0GTI1 187 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 K7ERQ8 282 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 LECT2O14960 151 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 POLR3GO15318 223 aaPredicted RBP1.64□□□□□ -2.15
PTCD3-209ENST00000472044 EPPINO95925 133 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 GUSBP08236 651 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 CTSGP08311 255 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 SLC35E2BP0CK96 405 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 NQO2P16083 231 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 AKR1C4P17516 323 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 S100A2P29034 98 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 SPAM1P38567 509 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 TMEM249Q2WGJ8 235 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 OR4A5Q8NH83 315 aa1.64□□□□□ -2.15
PTCD3-209ENST00000472044 MRAP2Q96G30 205 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms