RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 IGLV3-1P01715 115 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 CSTBP04080 98 aaKnown RBP5.29□□□□□ -1.56
HDAC1-204ENST00000471488 IL3RAP26951 378 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 HTR1FP30939 366 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 MTNR1BP49286 362 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 CFHR3Q02985 330 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF146Q15072 292 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 PLGLAQ15195 96 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 SLC35D3Q5M8T2 416 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 TMEM236Q5W0B7 351 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 DEGS2Q6QHC5 323 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 KRT74Q7RTS7 529 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 SLC35F2Q8IXU6 374 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 PGAM4Q8N0Y7 254 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 RNF152Q8N8N0 203 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 CNN2Q99439 309 aaKnown RBP5.29□□□□□ -1.56
HDAC1-204ENST00000471488 ZCCHC4Q9H5U6 513 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 GORASP2Q9H8Y8 452 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF355PQ9NSJ1 428 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 TVP23BQ9NYZ1 205 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 ABCD2Q9UBJ2 740 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 MRPS28Q9Y2Q9 187 aaKnown RBP5.29□□□□□ -1.56
HDAC1-204ENST00000471488 TMEM14AQ9Y6G1 99 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 PLECQ15149 4684 aaKnown RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 A0A087X0M5 115 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 A0A1B0GX30 115 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 ANKRD34BA5PLL1 514 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 SLC33A1O00400 549 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 SDCBPO00560 298 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 GNGT2O14610 69 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 CNIH1O95406 144 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 IL1AP01583 271 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 HMGN1P05114 100 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 KRT8P05787 483 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 LGALS1P09382 135 aaKnown RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 TMEM225BP0DP42 221 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 BLVRBP30043 206 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 TPPP2P59282 170 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 CD81P60033 236 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF816Q0VGE8 651 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 PDZK1IP1Q13113 114 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 CGB2Q6NT52 195 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 C8orf82Q6P1X6 216 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 BCDIN3DQ7Z5W3 292 aaKnown RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 IZUMO1Q8IYV9 350 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 RDH10Q8IZV5 341 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 PRR18Q8N4B5 295 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 CCDC107Q8WV48 283 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 RTN4IP1Q8WWV3 396 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 FLYWCH2Q96CP2 140 aaKnown RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 FEVQ99581 238 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF251Q9BRH9 671 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 OSBPL10Q9BXB5 764 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 DGCR6LQ9BY27 220 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 BARHL1Q9BZE3 327 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 CHST5Q9GZS9 411 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 TOLLIPQ9H0E2 274 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 HIPK2Q9H2X6 1198 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF556Q9HAH1 456 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 SLC25A19Q9HC21 320 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 H2AFY2Q9P0M6 372 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-204ENST00000471488 ERGIC3Q9Y282 383 aa5.28□□□□□ -1.56
HDAC1-204ENST00000471488 IGKV1-12A0A0C4DH73 117 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 LOC107986453A0A1B0GWG9 222 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 DHRS7CA6NNS2 312 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 HMGB1P1B2RPK0 211 aaPredicted RBP5.27□□□□□ -1.57
HDAC1-204ENST00000471488 H0Y980 276 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 CCDC22O60826 627 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 TPPPO94811 219 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 APOL3O95236 402 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 IGKV1D-12P01611 117 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 IGLV1-51P01701 117 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 HSPB1P04792 205 aaKnown RBP5.27□□□□□ -1.57
HDAC1-204ENST00000471488 IGF1P05019 195 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 ATF1P18846 271 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 RYR1P21817 5038 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 PRKACBP22694 351 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 CD1BP29016 333 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 CD40LGP29965 261 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 HMGA2P52926 109 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 RUNX1Q01196 453 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 ROM1Q03395 351 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 KIAA0141Q14154 515 aaPredicted RBP5.27□□□□□ -1.57
HDAC1-204ENST00000471488 EBI3Q14213 229 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 LPCAT4Q643R3 524 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 OR2T5Q6IEZ7 315 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 HACD2Q6Y1H2 254 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 HDXQ7Z353 690 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 FAM71E2Q8N5Q1 922 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 Q8N6K4 173 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 CHST4Q8NCG5 386 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 OR10V1Q8NGI7 309 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 OR2T29Q8NH02 315 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 NEK7Q8TDX7 302 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 GIPC3Q8TF64 312 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 RGP1Q92546 391 aaPredicted RBP5.27□□□□□ -1.57
HDAC1-204ENST00000471488 ARL11Q969Q4 196 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 UTP4Q969X6 686 aaKnown RBP5.27□□□□□ -1.57
HDAC1-204ENST00000471488 FGGYQ96C11 551 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 CMTM5Q96DZ9 223 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms