RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MRPL33O75394 65 aaKnown RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 SLC2A10O95528 541 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 FADS2O95864 444 aaKnown RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 CRHP06850 196 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 PIPP12273 146 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 ABOP16442 354 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 CRHBPP24387 322 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 HTR1FP30939 366 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 FMO3P31513 532 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 GUCA1AP43080 201 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 TDGF1P3P51864 188 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 BIDP55957 195 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 GABARAPL2P60520 117 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 RAB40BQ12829 278 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 KRR1Q13601 381 aaKnown RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 HIST3H3Q16695 136 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 MESTQ5EB52 335 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 SPANXN2Q5MJ10 180 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 OR2A2Q6IF42 318 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 LAIR2Q6ISS4 152 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 STEAP1BQ6NZ63 245 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 DNM1P34Q6PK57 102 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 AAED1Q7RTV5 226 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 EGFL6Q8IUX8 553 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 ZIC4Q8N9L1 334 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 CYB561A3Q8NBI2 242 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 SDR9C7Q8NEX9 313 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 BPIFB6Q8NFQ5 453 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 STXBP6Q8NFX7 210 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 FNDC9Q8TBE3 224 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 FAM57AQ8TBR7 257 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 APH1BQ8WW43 257 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 MYDGFQ969H8 173 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 ZFP3Q96NJ6 502 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 NMNAT3Q96T66 252 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 TEAD3Q99594 435 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 SLC30A2Q9BRI3 323 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 LINC00470Q9BZP3 86 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 OR51V1Q9H2C8 321 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 DUSP21Q9H596 190 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 CCNB1IP1Q9NPC3 277 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 RPRD1BQ9NQG5 326 aaKnown RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 ASF1BQ9NVP2 202 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 MED29Q9NX70 200 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 GLTPQ9NZD2 209 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 PIPOXQ9P0Z9 390 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 CLCF1Q9UBD9 225 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF835Q9Y2P0 537 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 NOSIPQ9Y314 301 aaKnown RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 FLVCR1Q9Y5Y0 555 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 POLEQ07864 2286 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 FREM1Q5H8C1 2179 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 USP24Q9UPU5 2620 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 ARHGAP21Q5T5U3 1957 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 COL6A6A6NMZ7 2263 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 CACNA1CQ13936 2221 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 FAM183AA6NL82 134 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 LRRC30A6NM36 301 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 RPL36A-HNRNPH2H7BZ11 118 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 M0R129 80 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 SLC16A7O60669 478 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 SS18L1O75177 396 aaPredicted RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 AQP8O94778 261 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 TGM6O95932 706 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 RPSAP08865 295 aaKnown RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 STAG3L3P0CL85 134 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 PGA4P0DJD7 388 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 PGA3P0DJD8 388 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 SPI1P17947 270 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 SLC2A5P22732 501 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 DCKP27707 260 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 CSNK1A1P48729 337 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF133P52736 654 aaPredicted RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 SLC35A2P78381 396 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 GLO1Q04760 184 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 ST3GAL4Q11206 333 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 APOFQ13790 326 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 GGTLC2Q14390 218 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 STK11Q15831 433 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 KLHL12Q53G59 568 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 PRSS48Q7RTY5 328 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 ABHD12BQ7Z5M8 362 aaPredicted RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 TMEM17Q86X19 198 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 DOLPP1Q86YN1 238 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 C20orf196Q8IYI0 205 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 TMEM123Q8N131 208 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 OR6V1Q8N148 313 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 INTS1Q8N201 2190 aaKnown RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 GPR137CQ8N3F9 429 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 STX19Q8N4C7 294 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 ST6GALNAC3Q8NDV1 305 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 PROKR2Q8NFJ6 384 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 BBS1Q8NFJ9 593 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 OR9Q1Q8NGQ5 310 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 OR6N1Q8NGY5 312 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 OR2T27Q8NH04 317 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 ABHD3Q8WU67 409 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 TMEM54Q969K7 222 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 UPRTQ96BW1 309 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 COQ2Q96H96 371 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms