RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ISPDA4D126 451 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 MEIS3P1A6NDR6 274 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 FOXI3A8MTJ6 420 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 TRAPPC2LH3BP13 241 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 RAB27BO00194 218 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 GEMIN2O14893 280 aaKnown RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 SOCS1O15524 211 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 FCN3O75636 299 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 PTTG1O95997 202 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4L2P0CJ85 424 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4L3P0CJ86 424 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4L4P0CJ87 422 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4L5P0CJ88 424 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4L6P0CJ89 424 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4L7P0CJ90 424 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DAOP14920 347 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 RPS2P15880 293 aaKnown RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 PRKACAP17612 351 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 GLRA1P23415 457 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 CD80P33681 288 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 BTCP35070 178 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 PITPNBP48739 271 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF134P52741 427 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 EFNA4P52798 201 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM50BP56557 158 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 FGF12P61328 243 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 MZT1Q08AG7 82 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ASAH1Q13510 395 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 GPR176Q14439 515 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 RSU1Q15404 277 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 TAF9Q16594 264 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 TRIQKQ629K1 86 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF57Q68EA5 555 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4L9Q6RFH8 374 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ACP7Q6ZNF0 438 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 LRRC28Q86X40 367 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 FAM58AQ8N1B3 248 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 FAM89BQ8N5H3 189 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF525Q8N782 197 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 GDPD1Q8N9F7 314 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 BOLLQ8N9W6 283 aaKnown RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DEFB108BQ8NET1 73 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 OR5T2Q8NGG2 359 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 OR51T1Q8NGJ9 327 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 OR10Z1Q8NGY1 313 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 KCNG3Q8TAE7 436 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 NEU4Q8WWR8 484 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 UPRTQ96BW1 309 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 CPNE2Q96FN4 548 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 THAP7Q9BT49 309 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 SELENOIQ9C0D9 397 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 HEYLQ9NQ87 328 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 GHRLQ9UBU3 117 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 DUX4Q9UBX2 424 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 KLK11Q9UBX7 282 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 PRELID1Q9Y255 219 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ST3GAL6Q9Y274 331 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 CACNA1DQ01668 2161 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 IGKV1D-17A0A075B6S4 117 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 RFPL4AA6NLU0 287 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 RFPL4AL1F8VTS6 287 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 TNFRSF13BO14836 293 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF780AO75290 641 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-208ENST00000470268 NXPH2O95156 264 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 HLA-DQB1P01920 261 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 MT-ND4P03905 459 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 CSTBP04080 98 aaKnown RBP3.93□□□□□ -1.78
SF3B1-208ENST00000470268 UBBP0CG47 229 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 PSG2P11465 335 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 GTF2F2P13984 249 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 SELLP14151 372 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 PAX1P15863 534 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 CDK2P24941 298 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 PPIFP30405 207 aaKnown RBP3.93□□□□□ -1.78
SF3B1-208ENST00000470268 PTH2RP49190 550 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 VEGFCP49767 419 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 CCR6P51684 374 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 RBM11P57052 281 aaKnown RBP3.93□□□□□ -1.78
SF3B1-208ENST00000470268 RPS27AP62979 156 aaKnown RBP3.93□□□□□ -1.78
SF3B1-208ENST00000470268 SCN1BQ07699 218 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF146Q15072 292 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ZMYND11Q15326 602 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 HFEQ30201 348 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 BEAN1Q3B7T3 259 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 NHLRC3Q5JS37 347 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 PLAC9Q5JTB6 97 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 TEX36Q5VZQ5 186 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 OLFML2AQ68BL7 652 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 Q6P435 159 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 OR2W3Q7Z3T1 314 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 OSR2Q8N2R0 312 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 FGFRL1Q8N441 504 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 CD177Q8N6Q3 437 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 OR52I2Q8NH67 350 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ANGPTL6Q8NI99 470 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ACOT12Q8WYK0 555 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 RDH5Q92781 318 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 EMG1Q92979 244 aaKnown RBP3.93□□□□□ -1.78
SF3B1-208ENST00000470268 PERPQ96FX8 193 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 S100A13Q99584 98 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms