RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 NAA50Q9GZZ1 169 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 DIABLOQ9NR28 239 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 RHBDL2Q9NX52 303 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 ONECUT1Q9UBC0 465 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 CEPT1Q9Y6K0 416 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 TRBV6-6A0A0A6YYG2 114 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 KBTBD11-OT1A0A1B0GTJ5 212 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 RAB27BO00194 218 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 TPPPO94811 219 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 GSTP1P09211 210 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 FPR2P25090 351 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 SRP14P37108 136 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 GLIPR1P48060 266 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 ERVFRD-1P60508 538 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 MRPS15P82914 257 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 PITPNAQ00169 270 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 ATXN7L3Q14CW9 347 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 C6orf183Q5T699 404 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 GPR157Q5UAW9 335 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 HEPN1Q6WQI6 88 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 MOB1BQ7L9L4 216 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 TRAPPC6BQ86SZ2 158 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 LGALS14Q8TCE9 139 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 ISOC1Q96CN7 298 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 ATG5Q9H1Y0 275 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 ABCG5Q9H222 651 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 KCNIP1Q9NZI2 227 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 KIF25Q9UIL4 384 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 NUP50Q9UKX7 468 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 WNK2Q9Y3S1 2297 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 MTORP42345 2549 aa10.38□□□□□ -0.75
SPTLC1-204ENST00000469778 SMIM30A4D0T7 59 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 HSPB6O14558 160 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 SOCS1O15524 211 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 AVPP01185 164 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 FSHBP01225 129 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 APOA1P02647 267 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 FAM157CP0CG43 387 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 CGB3P0DN86 165 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 CGB7P0DN87 165 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 SNRPBP14678 240 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 DLX6P56179 175 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 TMEM50BP56557 158 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 SRSF7Q16629 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 UBE2NLQ5JXB2 153 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 NKAPLQ5M9Q1 402 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 RTN4RL2Q86UN3 420 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 C11orf42Q8N5U0 333 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 OR52M1Q8NGK5 317 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 DGCR14Q96DF8 476 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 SULT4A1Q9BR01 284 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 NICN1Q9BSH3 213 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 PCGF1Q9BSM1 259 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 FAAP24Q9BTP7 215 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 MBNL3Q9NUK0 354 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 RSL24D1Q9UHA3 163 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 TRAPPC2LQ9UL33 140 aa10.37□□□□□ -0.75
SPTLC1-204ENST00000469778 A0A0A6YYD4 124 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 INAFM1C9JVW0 142 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 H3BMQ9 156 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 SPINT2O43291 252 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 NAPSAO96009 420 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 PAHP00439 452 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 IGHV1-8P0DP01 117 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 HIST1H1DP16402 221 aaKnown RBP10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 SRD5A1P18405 259 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 TGFBR1P36897 503 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 UBE2E1P51965 193 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 EFNB2P52799 333 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 ZNF273Q14593 569 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 PNLIPRP3Q17RR3 467 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 C1orf229Q6ZS94 237 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 C6orf201Q7Z4U5 140 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 VMO1Q7Z5L0 202 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 LURAP1LQ8IV03 231 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 Q8N7P7 452 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 OR13D1Q8NGV5 346 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 NDNFQ8TB73 568 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 C15orf40Q8WUR7 153 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 CREB3L1Q96BA8 519 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 ARHGAP5-AS1Q96IT6 56 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 TBX15Q96SF7 602 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 PECRQ9BY49 303 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 C12orf4Q9NQ89 552 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 CCDC59Q9P031 241 aaKnown RBP10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 SESN1Q9Y6P5 492 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
SPTLC1-204ENST00000469778 A0A087X0M5 115 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 A0A0B4J203 849 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 IGHV1-69DA0A0B4J2H0 117 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 A0A1B0GX30 115 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 UBE2QL1A1L167 161 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 CCDC160A6NGH7 325 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 MFNGO00587 321 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms