RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 HDHD3Q9BSH5 251 aaPredicted RBP10.62□□□□□ -0.71
TRAF4-208ENST00000469529 TOLLIPQ9H0E2 274 aa10.62□□□□□ -0.71
TRAF4-208ENST00000469529 LINC00574Q9H8X3 128 aa10.62□□□□□ -0.71
TRAF4-208ENST00000469529 ZNF286AQ9HBT8 521 aa10.62□□□□□ -0.71
TRAF4-208ENST00000469529 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
TRAF4-208ENST00000469529 MYO9AB2RTY4 2548 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 IGHV3OR15-7A0A075B7D8 119 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 FAM240BA0A1B0GVZ2 78 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 MEIS3P1A6NDR6 274 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 DISC1C4P0D8 188 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 CGB3P0DN86 165 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 CGB7P0DN87 165 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 HLA-DMAP28067 261 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 GABRA2P47869 451 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 KRTAP10-9P60411 292 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 HOXA4Q00056 320 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 MEF2CQ06413 473 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 TRIM16LQ309B1 348 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 RNASE12Q5GAN4 147 aaKnown RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 RNASE10Q5GAN6 216 aaKnown RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 CCBE1Q6UXH8 406 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 CENPSQ8N2Z9 138 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 ZNRF1Q8ND25 227 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 DEFB108BQ8NET1 73 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 OR4A4PQ8NGN8 299 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 DMRTB1Q96MA1 342 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 CCL13Q99616 98 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 PRRT1Q99946 306 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 SLC25A21Q9BQT8 299 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 MARVELD1Q9BSK0 173 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 PPA2Q9H2U2 334 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 BARX1Q9HBU1 254 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 ZNF230Q9UIE0 474 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-208ENST00000469529 SCP2D1Q9UJQ7 156 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 PCDHB10Q9UN67 800 aa10.61□□□□□ -0.71
TRAF4-208ENST00000469529 IGKV1D-8A0A087WSZ0 117 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 NKX6-3A6NJ46 265 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 NPIPB11E5RHQ5 1161 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 GYPAP02724 150 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 HRH1P35367 487 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 CDKN1AP38936 164 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 OR3A3P47888 321 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 CEBPDP49716 269 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-208ENST00000469529 MECP2P51608 486 aaKnown RBP10.6□□□□□ -0.71
TRAF4-208ENST00000469529 P2RX3P56373 397 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 CDK10Q15131 360 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 HMGN3Q15651 99 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 CHRFAM7AQ494W8 412 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 KRBOX4Q5JUW0 171 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 C6orf183Q5T699 404 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 ZNF660Q6AZW8 331 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-208ENST00000469529 OR52W1Q6IF63 320 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 TMEM17Q86X19 198 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 ZNF565Q8N9K5 539 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 ASCC1Q8N9N2 400 aaKnown RBP10.6□□□□□ -0.71
TRAF4-208ENST00000469529 OR5H2Q8NGV7 314 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 TERB2Q8NHR7 220 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 GIMAP1Q8WWP7 306 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 CCL19Q99731 98 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 TINAGL1Q9GZM7 467 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-208ENST00000469529 ALX4Q9H161 411 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-208ENST00000469529 DPAGT1Q9H3H5 408 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 CHMP1AQ9HD42 196 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-208ENST00000469529 NECAP2Q9NVZ3 263 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 OR6C3Q9NZP0 311 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 MIOXQ9UGB7 285 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 SLC23A1Q9UHI7 598 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 DCHS2Q6V1P9 2916 aa10.6□□□□□ -0.71
TRAF4-208ENST00000469529 LINC00854A0A1B0GVQ3 168 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 ODAMA1E959 279 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 VGLL3A8MV65 326 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 LYNX1G3V0Z9 82 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 NDUFS8O00217 210 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 FABP7O15540 132 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 NDUFB6O95139 128 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 TCRBP04435 133 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 FCER2P06734 321 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 HEXAP06865 529 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 WNT2P09544 360 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 GSTT2P0CG29 244 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 LYNX1P0DP58 116 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 RCC1P18754 421 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-208ENST00000469529 NPY4RP50391 375 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 DSCR9P59020 149 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 AESQ08117 197 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 SURF2Q15527 256 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-208ENST00000469529 ZNF841Q6ZN19 808 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 BTN2A1Q7KYR7 527 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 LHFPL1Q86WI0 220 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 SPICQ8N5J4 248 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 ENKURQ8TC29 256 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 FAM216AQ8WUB2 273 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 CREB3L1Q96BA8 519 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 SLC6A7Q99884 636 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 GSX2Q9BZM3 304 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 RAB9BQ9NP90 201 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms