RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ADARB2-AS1A8MUL3 147 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 IL1AP01583 271 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 FAM106CPP0CH98 169 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 SERPINA2P20848 420 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 BDKRB2P30411 391 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 OSR2Q8N2R0 312 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 SUMF2Q8NBJ7 301 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 SMIM19Q96E16 107 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 DPCDQ9BVM2 203 aaPredicted RBP17.39■□□□□ 0.37
TTC28-204ENST00000468807 ZNF581Q9P0T4 197 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 CLEC2DQ9UHP7 191 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 ZNF281Q9Y2X9 895 aa17.39■□□□□ 0.37
TTC28-204ENST00000468807 EXOSC1Q9Y3B2 195 aaKnown RBP17.39■□□□□ 0.37
TTC28-204ENST00000468807 DNAH3Q8TD57 4116 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 OOSP1A8MZH6 123 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 LY6LH3BQJ8 138 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 J3QR06 171 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 CGB3P0DN86 165 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 CGB7P0DN87 165 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 PF4V1P10720 104 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 SSTR5P35346 364 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 MED21Q13503 144 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 KHDC1LQ5JSQ8 128 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 ZFP41Q8N8Y5 198 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 TMEM80Q96HE8 168 aa17.38■□□□□ 0.37
TTC28-204ENST00000468807 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.38■□□□□ 0.37
TTC28-204ENST00000468807 DIMT1Q9UNQ2 313 aaKnown RBP17.38■□□□□ 0.37
TTC28-204ENST00000468807 TCRBV4S1A1TA0A5B7 111 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 LALBAP00709 142 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 KCNJ3P48549 501 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 RBM11P57052 281 aaKnown RBP17.37■□□□□ 0.37
TTC28-204ENST00000468807 RIPK1Q13546 671 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 HES1Q14469 280 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 ATAD3CQ5T2N8 411 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 TTC23Q5W5X9 447 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 ASCL4Q6XD76 172 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 SETD9Q8NE22 299 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 OR10X1Q8NGY0 326 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 OR52N1Q8NH53 320 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 OR56B4Q8NH76 319 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 NEK7Q8TDX7 302 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 GHSRQ92847 366 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 NCOR1P1Q9H4R4 102 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 PCDHB16Q9NRJ7 776 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 CKLFQ9UBR5 152 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 PSG11Q9UQ72 335 aa17.37■□□□□ 0.37
TTC28-204ENST00000468807 GEMIN2O14893 280 aaKnown RBP17.36■□□□□ 0.37
TTC28-204ENST00000468807 OGG1O15527 345 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 SNRNP70P08621 437 aaKnown RBP17.36■□□□□ 0.37
TTC28-204ENST00000468807 CD83Q01151 205 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 MADCAM1Q13477 382 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 SLC22A6Q4U2R8 563 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 KPRPQ5T749 579 aaPredicted RBP17.36■□□□□ 0.37
TTC28-204ENST00000468807 Q8NFD4 153 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 OR4X2Q8NGF9 303 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 SGCDQ92629 289 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 ZNF184Q99676 751 aaPredicted RBP17.36■□□□□ 0.37
TTC28-204ENST00000468807 PAK1IP1Q9NWT1 392 aaPredicted RBP17.36■□□□□ 0.37
TTC28-204ENST00000468807 IL36GQ9NZH8 169 aa17.36■□□□□ 0.37
TTC28-204ENST00000468807 PNMA8CA0A1B0GUJ8 204 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 A0A1W2PPE3 182 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 M0QZK8 103 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 AMY1AP04745 511 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 AMY2AP04746 511 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 CD33P20138 364 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 DRAM1Q8N682 238 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 MOB4Q9Y3A3 225 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 HSPE1-MOB4S4R3N1 261 aa17.35■□□□□ 0.37
TTC28-204ENST00000468807 A0A1W2PP11 408 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 A0A1W2PPK0 400 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 TMEM30CPA0ZSE6 113 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 NPIPB11E5RHQ5 1161 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 PAX5Q02548 391 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 DIAPH2-AS1Q14236 149 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 NHLRC3Q5JS37 347 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 DMKNQ6E0U4 476 aaPredicted RBP17.34■□□□□ 0.37
TTC28-204ENST00000468807 C10orf99Q6UWK7 81 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 LINC00596Q86U02 117 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 DHRSXQ8N5I4 330 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 UBALD1Q8TB05 177 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 CCDC107Q8WV48 283 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 MYDGFQ969H8 173 aa17.34■□□□□ 0.37
TTC28-204ENST00000468807 TSSC4Q9Y5U2 329 aaPredicted RBP17.34■□□□□ 0.37
TTC28-204ENST00000468807 MAGEA13PA6NCF6 341 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 ZNF780AO75290 641 aaPredicted RBP17.33■□□□□ 0.36
TTC28-204ENST00000468807 PF4P02776 101 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 GTF2F2P13984 249 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 TMEM11P17152 192 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 HNF4GQ14541 408 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 MPV17LQ2QL34 196 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 Q499Y3 187 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 YIF1BQ5BJH7 314 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 TCTEX1D4Q5JR98 221 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 JAGN1Q8N5M9 183 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 OR10A7Q8NGE5 316 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 IFT22Q9H7X7 185 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 LINC00574Q9H8X3 128 aa17.33■□□□□ 0.36
TTC28-204ENST00000468807 TRBV5-5A0A0J9YX44 114 aa17.32■□□□□ 0.36
TTC28-204ENST00000468807 A0A1W2PPI3 338 aa17.32■□□□□ 0.36
TTC28-204ENST00000468807 IGFBP3P17936 291 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms