RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 TRAV39A0A0B4J263 110 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 ODAMA1E959 279 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 SOCS1O15524 211 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 PDCD6O75340 191 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 CSN2P05814 226 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 CHATP28329 748 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 ERP29P30040 261 aaKnown RBP12.06□□□□□ -0.48
COL16A1-208ENST00000468459 FOXL1Q12952 345 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 KLRD1Q13241 179 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 IDNKQ5T6J7 187 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 RSBN1Q5VWQ0 802 aaPredicted RBP12.06□□□□□ -0.48
COL16A1-208ENST00000468459 CLVS1Q8IUQ0 354 aaPredicted RBP12.06□□□□□ -0.48
COL16A1-208ENST00000468459 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 KIR3DL3Q8N743 410 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 NDNFQ8TB73 568 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 NEK7Q8TDX7 302 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 PRDM13Q9H4Q3 707 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 PEX16Q9Y5Y5 336 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 KPTNQ9Y664 436 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 CMYA5Q8N3K9 4069 aa12.06□□□□□ -0.48
COL16A1-208ENST00000468459 UBE2QL1A1L167 161 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A10PA6NDY2 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A18PA6NE21 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A16PA6NEW6 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A20PA6NIJ5 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A7PA6NKC0 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A22PA8MWA6 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A12PA8MX19 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A5PA8MXJ8 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A23PA8MXZ1 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A15PP0C7V4 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A13PP0C7W8 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A14PP0C7W9 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FAM90A24PP0C7X0 464 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FUT3P21217 361 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 BAMBIQ13145 260 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 PRR31Q5SQ13 230 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 C6orf201Q7Z4U5 140 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 TRAPPC6BQ86SZ2 158 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 C11orf42Q8N5U0 333 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 OR5H6Q8NGV6 325 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 SULT4A1Q9BR01 284 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 MS4A7Q9GZW8 240 aaPredicted RBP12.05□□□□□ -0.48
COL16A1-208ENST00000468459 FBLN5Q9UBX5 448 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 LINC00312Q9Y6C7 94 aa12.05□□□□□ -0.48
COL16A1-208ENST00000468459 MEIKINA0A087WXM9 373 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 hADV38S2A0JD32 116 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 FOXI3A8MTJ6 420 aaPredicted RBP12.04□□□□□ -0.48
COL16A1-208ENST00000468459 M0R1W7 72 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 MMP23AO75900 390 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 IL1AP01583 271 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 ZNF728P0DKX0 622 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 BLVRBP30043 206 aaPredicted RBP12.04□□□□□ -0.48
COL16A1-208ENST00000468459 GLP1RP43220 463 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 VEGFCP49767 419 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 MEF2CQ06413 473 aaPredicted RBP12.04□□□□□ -0.48
COL16A1-208ENST00000468459 MOGAT2Q3SYC2 334 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 RUSC1-AS1Q66K80 236 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 ZNF782Q6ZMW2 699 aaPredicted RBP12.04□□□□□ -0.48
COL16A1-208ENST00000468459 CMTM4Q8IZR5 234 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 LHX4Q969G2 390 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 NEDD4LQ96PU5 975 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 URM1Q9BTM9 101 aaKnown RBP12.04□□□□□ -0.48
COL16A1-208ENST00000468459 BARHL1Q9BZE3 327 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 ETAA1Q9NY74 926 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 RAB22AQ9UL26 194 aa12.04□□□□□ -0.48
COL16A1-208ENST00000468459 DSCAML1Q8TD84 2053 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 TRGV10A0A0A0MS01 117 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 A0A1W2PRD5 423 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 A0A1W2PRF3 423 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 A0A1W2PRM7 423 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 TMEM30CPA0ZSE6 113 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 MCRIP1C9JLW8 97 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 RNASEK-C17orf49H0YIS7 233 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 WIPF1O43516 503 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 GDNFP39905 211 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 KCNJ3P48549 501 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 SPCS2Q15005 226 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 PRAMEF5Q5TYX0 476 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 SHISA2Q6UWI4 295 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 BAIAP2L2Q6UXY1 529 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 BRD3OSQ6XYD6 125 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 ZNF497Q6ZNH5 498 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 PNKDQ8N490 385 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 FAM89BQ8N5H3 189 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 MRGPRDQ8TDS7 321 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 CCDC107Q8WV48 283 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL16A1-208ENST00000468459 TNFRSF14Q92956 283 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 ZNF714Q96N38 554 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 FAAP24Q9BTP7 215 aa12.03□□□□□ -0.48
COL16A1-208ENST00000468459 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.48
COL16A1-208ENST00000468459 CENPVL3A0A0U1RRI6 287 aa12.02□□□□□ -0.49
COL16A1-208ENST00000468459 MDFIC2A0A1B0GVS7 189 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms