RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HSF4Q9ULV5 492 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 CADP27708 2225 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 J3QT63 122 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 ABCD4O14678 606 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 SCGNO76038 276 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 PPP3CBP16298 524 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF573Q86YE8 665 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 TMEM229BQ8NBD8 167 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 CHST4Q8NCG5 386 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 LINC01560Q8TB33 94 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 NEUROG1Q92886 237 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 NUDT11Q96G61 164 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 SYT3Q9BQG1 590 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 NRIP2Q9BQI9 281 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 FAAP24Q9BTP7 215 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 RTL8AQ9BWD3 113 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 ELL3Q9HB65 397 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 GOLT1BQ9Y3E0 138 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 CDIPTO14735 213 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 TIMM8AO60220 97 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 PGA5P0DJD9 388 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 PMELP40967 661 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 OR8G1Q15617 311 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 Q6P435 159 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 UNQ6126/PRO20091Q6UXV3 157 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 NEK7Q8TDX7 302 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 EMG1Q92979 244 aaKnown RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 MRPL24Q96A35 216 aaKnown RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 DNTTIP1Q9H147 329 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 CA10Q9NS85 328 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 AK3Q9UIJ7 227 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 PLEKHA6Q9Y2H5 1048 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 CA11O75493 328 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 TCRBP04435 133 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 CRYGCP07315 174 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 TLE1Q04724 770 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ARL6IP1Q15041 203 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 USF2Q15853 346 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ST3GAL2Q16842 350 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF826PQ6ZT77 177 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 MKXQ8IYA7 352 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 OR8S1Q8NH09 359 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ITLN2Q8WWU7 325 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 EDARADDQ8WWZ3 215 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 S100A13Q99584 98 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 GAL3ST2Q9H3Q3 398 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF230Q9UIE0 474 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF107Q9UII5 783 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 C1QL1O75973 258 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 IGHV2-70P01814 119 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 PRB1P04280 392 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 FBP1P09467 338 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 CSF1P09603 554 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 CARTPTQ16568 116 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 MST1LQ2TV78 715 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 WDR82Q6UXN9 313 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 OR56B4Q8NH76 319 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 HIST1H2AAQ96QV6 131 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 CXXC4Q9H2H0 198 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 MS4A5Q9H3V2 200 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 UNKLQ9H9P5 680 aaKnown RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ERRFI1Q9UJM3 462 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF221Q9UK13 617 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 FLVCR2Q9UPI3 526 aa6.97□□□□□ -1.29
BRCA1-208ENST00000468300 NOP16Q9Y3C1 178 aaKnown RBP6.97□□□□□ -1.29
BRCA1-208ENST00000468300 TRAV24A0A0B4J272 114 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A10PA6NDY2 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A18PA6NE21 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A16PA6NEW6 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A20PA6NIJ5 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A8PA6NJQ4 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A7PA6NKC0 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A22PA8MWA6 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A12PA8MX19 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A5PA8MXJ8 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A23PA8MXZ1 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.96□□□□□ -1.29
BRCA1-208ENST00000468300 M0QYG6 137 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 CYB5R3P00387 301 aaPredicted RBP6.96□□□□□ -1.29
BRCA1-208ENST00000468300 PLAUP00749 431 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A15PP0C7V4 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A13PP0C7W8 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A14PP0C7W9 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A24PP0C7X0 464 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 CD200P41217 278 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 KLF3P57682 345 aaPredicted RBP6.96□□□□□ -1.29
BRCA1-208ENST00000468300 AP3S2P59780 193 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 SORDQ00796 357 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 C4orf17Q53FE4 359 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 ADAM5Q6NVV9 412 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 STEAP1BQ6NZ63 245 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 KCTD9Q7L273 389 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 STXBP6Q8NFX7 210 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 DEDD2Q8WXF8 326 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 MARVELD3Q96A59 401 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 CREB3L1Q96BA8 519 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 NARS2Q96I59 477 aaKnown RBP6.96□□□□□ -1.29
BRCA1-208ENST00000468300 SLC6A7Q99884 636 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 MICU1Q9BPX6 476 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms