RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 DPCDQ9BVM2 203 aaPredicted RBP14□□□□□ -0.17
COL7A1-206ENST00000466591 TMEM138Q9NPI0 162 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 A0A087X0M5 115 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 TRAV24A0A0B4J272 114 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 A0A1B0GX30 115 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 TMEM30CPA0ZSE6 113 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 SNRNP70P08621 437 aaKnown RBP13.99□□□□□ -0.17
COL7A1-206ENST00000466591 BDKRB2P30411 391 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 RAB7AP51149 207 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 SLC35A2P78381 396 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 HNF4GQ14541 408 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 FBLN7Q53RD9 439 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 OSR2Q8N2R0 312 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 SUMF2Q8NBJ7 301 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 MYDGFQ969H8 173 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 PHF21AQ96BD5 680 aa13.99□□□□□ -0.17
COL7A1-206ENST00000466591 PSMB11A5LHX3 300 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 ZNF780AO75290 641 aaPredicted RBP13.98□□□□□ -0.17
COL7A1-206ENST00000466591 LIMS3P0CW19 117 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 LIMS4P0CW20 117 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 IGLL1P15814 213 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 SSTR5P35346 364 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 LOXL3P58215 753 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 CD83Q01151 205 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 RIPK1Q13546 671 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 SMN1Q16637 294 aaKnown RBP13.98□□□□□ -0.17
COL7A1-206ENST00000466591 DRAM1Q8N682 238 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 SETD9Q8NE22 299 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 OR51D1Q8NGF3 324 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 OR52N1Q8NH53 320 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 DPF1Q92782 380 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 RDH12Q96NR8 316 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 ZNF649Q9BS31 505 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 RAB9BQ9NP90 201 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 FGF20Q9NP95 211 aaPredicted RBP13.98□□□□□ -0.17
COL7A1-206ENST00000466591 MRPS18AQ9NVS2 196 aaKnown RBP13.98□□□□□ -0.17
COL7A1-206ENST00000466591 ZNF281Q9Y2X9 895 aa13.98□□□□□ -0.17
COL7A1-206ENST00000466591 EXOSC1Q9Y3B2 195 aaKnown RBP13.98□□□□□ -0.17
COL7A1-206ENST00000466591 PLXNB1O43157 2135 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 SERPINE3A8MV23 424 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 NUDT19A8MXV4 375 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 E9PQ18 207 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 SDCBPO00560 298 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-206ENST00000466591 IL3RAP26951 378 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 ETV1P50549 477 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 SLC35B1P78383 322 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 LRRC36Q1X8D7 754 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 SLC22A6Q4U2R8 563 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 OR2G6Q5TZ20 316 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 MOB3BQ86TA1 216 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 LINC00596Q86U02 117 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 OR8H3Q8N146 312 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 OR10A7Q8NGE5 316 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 APH1BQ8WW43 257 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 NCOR1P1Q9H4R4 102 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 BABAM2Q9NXR7 383 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 PSG11Q9UQ72 335 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 KIAA2026Q5HYC2 2103 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 TGP01266 2768 aa13.97□□□□□ -0.17
COL7A1-206ENST00000466591 TRAV39A0A0B4J263 110 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 A0A1W2PPE3 182 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 NCBP2LA6PVI3 153 aaKnown RBP13.96□□□□□ -0.17
COL7A1-206ENST00000466591 ADARB2-AS1A8MUL3 147 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 CCRL2O00421 344 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 IGKV1D-33P01593 117 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 IGKV1-33P01594 117 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 GTF2F2P13984 249 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 GZMHP20718 246 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 RBM11P57052 281 aaKnown RBP13.96□□□□□ -0.17
COL7A1-206ENST00000466591 GPR176Q14439 515 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 RSBN1Q5VWQ0 802 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-206ENST00000466591 TTC23Q5W5X9 447 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 SLC16A12Q6ZSM3 486 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 FOXRED2Q8IWF2 684 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 JAGN1Q8N5M9 183 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 PLPPR1Q8TBJ4 325 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 WIPF2Q8TF74 440 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-206ENST00000466591 CCDC107Q8WV48 283 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 RGP1Q92546 391 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-206ENST00000466591 ARL11Q969Q4 196 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 SMIM19Q96E16 107 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 TMEM80Q96HE8 168 aa13.96□□□□□ -0.17
COL7A1-206ENST00000466591 ZNF184Q99676 751 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-206ENST00000466591 LY6LH3BQJ8 138 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 HSD17B6O14756 317 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 GEMIN2O14893 280 aaKnown RBP13.95□□□□□ -0.18
COL7A1-206ENST00000466591 GAPDHP04406 335 aaKnown RBP13.95□□□□□ -0.18
COL7A1-206ENST00000466591 MPV17LQ2QL34 196 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 FOXB2Q5VYV0 432 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 XAF1Q6GPH4 301 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 Q6ZPA2 131 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 THNSL2Q86YJ6 484 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 GPR61Q9BZJ8 451 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 AURKAIP1Q9NWT8 199 aaPredicted RBP13.95□□□□□ -0.18
COL7A1-206ENST00000466591 TRAPPC2LQ9UL33 140 aa13.95□□□□□ -0.18
COL7A1-206ENST00000466591 DIMT1Q9UNQ2 313 aaKnown RBP13.95□□□□□ -0.18
COL7A1-206ENST00000466591 PNMA8CA0A1B0GUJ8 204 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 MCRIP1C9JLW8 97 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 AIPO00170 330 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 WBP4O75554 376 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms