RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 FCGR1AP12314 374 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 ZNF19P17023 458 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 RPL23AP62750 156 aaKnown RBP7.66□□□□□ -1.18
USP39-212ENST00000465514 BNIP1Q12981 228 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 C18orf65Q6ZTR6 163 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 C8orf86Q6ZUL3 223 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 OVCH2Q7RTZ1 564 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 DRAM1Q8N682 238 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 ZNF565Q8N9K5 539 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 OR56B4Q8NH76 319 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 TRUB1Q8WWH5 349 aaKnown RBP7.66□□□□□ -1.18
USP39-212ENST00000465514 TOMM40LQ969M1 308 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 RPEQ96AT9 228 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 PELI1Q96FA3 418 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 CENPNQ96H22 339 aaPredicted RBP7.66□□□□□ -1.18
USP39-212ENST00000465514 KIRREL1Q96J84 757 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 NOL4LQ96MY1 436 aaPredicted RBP7.66□□□□□ -1.18
USP39-212ENST00000465514 NR1H4Q96RI1 486 aaPredicted RBP7.66□□□□□ -1.18
USP39-212ENST00000465514 PCDHB16Q9NRJ7 776 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 IMPAD1Q9NX62 359 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 CALYQ9NYX4 217 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 KIF25Q9UIL4 384 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 AMMECR1Q9Y4X0 333 aaPredicted RBP7.66□□□□□ -1.18
USP39-212ENST00000465514 MEIKINA0A087WXM9 373 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 H0YJX3 145 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 HCKP08631 526 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 DBTP11182 482 aaKnown RBP7.65□□□□□ -1.18
USP39-212ENST00000465514 TMEM11P17152 192 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 C21orf33P30042 268 aaPredicted RBP7.65□□□□□ -1.18
USP39-212ENST00000465514 GLP1RP43220 463 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 MTNR1BP49286 362 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 RAB25P57735 213 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 ZP1P60852 638 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 ALKBH1Q13686 389 aaKnown RBP7.65□□□□□ -1.18
USP39-212ENST00000465514 DIAPH2-AS1Q14236 149 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 HES1Q14469 280 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 HNF4GQ14541 408 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 KISS1Q15726 138 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 LTC4SQ16873 150 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 PAN3Q58A45 887 aaKnown RBP7.65□□□□□ -1.18
USP39-212ENST00000465514 SLC25A30Q5SVS4 291 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 C1orf146Q5VVC0 180 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 OR2W3Q7Z3T1 314 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 ACBD7Q8N6N7 88 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 C5orf56Q8N8D9 126 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 OR51T1Q8NGJ9 327 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 OR5D14Q8NGL3 314 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 OR13A1Q8NGR1 328 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 CNIH3Q8TBE1 160 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 CHPT1Q8WUD6 406 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 C4orf36Q96KX1 117 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 P2RX4Q99571 388 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 LINC00574Q9H8X3 128 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 IDI2-AS1Q9NZ38 188 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 LINC00527Q9UJ94 153 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 PSG11Q9UQ72 335 aa7.65□□□□□ -1.18
USP39-212ENST00000465514 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 TRAV24A0A0B4J272 114 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 A0A1W2PPI3 338 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 SERPINE3A8MV23 424 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 NUDT19A8MXV4 375 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 SULT1B1O43704 296 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 IL1AP01583 271 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 FRMD6-AS1P0C7T7 363 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 MYCNOSP40205 109 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 GNG10P50151 68 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 SNRPGP62308 76 aaKnown RBP7.64□□□□□ -1.19
USP39-212ENST00000465514 MADCAM1Q13477 382 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 ZSCAN26Q16670 478 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 ZNF691Q5VV52 312 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 MEDAGQ5VYS4 303 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 ELP2Q6IA86 826 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 LHFPL3Q86UP9 236 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 SERPINA12Q8IW75 414 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 RFESDQ8TAC1 157 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 HAVCR2Q8TDQ0 301 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 LGALS12Q96DT0 336 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 DUX3Q96PT4 197 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 BARHL1Q9BZE3 327 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 NCOR1P1Q9H4R4 102 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 ISG20L2Q9H9L3 353 aaKnown RBP7.64□□□□□ -1.19
USP39-212ENST00000465514 ZFP57Q9NU63 452 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 AASSQ9UDR5 926 aa7.64□□□□□ -1.19
USP39-212ENST00000465514 EXOGQ9Y2C4 368 aaKnown RBP7.64□□□□□ -1.19
USP39-212ENST00000465514 ZNF256Q9Y2P7 627 aaPredicted RBP7.64□□□□□ -1.19
USP39-212ENST00000465514 TRAV39A0A0B4J263 110 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 A0A1W2PPE3 182 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 LINC01548A6NM66 108 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 NPIPB11E5RHQ5 1161 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 E9PI62 339 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 FGF16O43320 207 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 LY86O95711 162 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 IGKV1D-33P01593 117 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 IGKV1-33P01594 117 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 IGHG2P01859 326 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 SLC6A1P30531 599 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 VEGFCP49767 419 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 RAB7AP51149 207 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 SLC35B1P78383 322 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 GALEQ14376 348 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms