RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 METTL8Q9H825 291 aaKnown RBP14.49□□□□□ -0.09
COL7A1-205ENST00000465238 SIRT7Q9NRC8 400 aa14.49□□□□□ -0.09
COL7A1-205ENST00000465238 ZNF581Q9P0T4 197 aa14.49□□□□□ -0.09
COL7A1-205ENST00000465238 POMT1Q9Y6A1 747 aa14.49□□□□□ -0.09
COL7A1-205ENST00000465238 CENPVL3A0A0U1RRI6 287 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 MEX3AA1L020 520 aaKnown RBP14.48□□□□□ -0.09
COL7A1-205ENST00000465238 IFITM5A6NNB3 132 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 CCL3L1P16619 93 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 GLIPR1P48060 266 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 CLDN12P56749 244 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 RPS27AP62979 156 aaKnown RBP14.48□□□□□ -0.09
COL7A1-205ENST00000465238 RBM39Q14498 530 aaKnown RBP14.48□□□□□ -0.09
COL7A1-205ENST00000465238 METAP1DQ6UB28 335 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-205ENST00000465238 Q8N7P7 452 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 KCNK15Q9H427 330 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 RNF167Q9H6Y7 350 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 BEX1Q9HBH7 125 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 LINC00312Q9Y6C7 94 aa14.48□□□□□ -0.09
COL7A1-205ENST00000465238 TRGV10A0A0A0MS01 117 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 ODAMA1E959 279 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 SMIM30A4D0T7 59 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 NOTOA8MTQ0 251 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 TMEM14DPA8MWL7 114 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 MCRIP1C9JLW8 97 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 KCNAB3O43448 404 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 MELTFP08582 738 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 ZNF728P0DKX0 622 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 FUT3P21217 361 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 SDC2P34741 201 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 RAG2P55895 527 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 RPL15P61313 204 aaKnown RBP14.47□□□□□ -0.09
COL7A1-205ENST00000465238 QRFPP83859 136 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 UNC119Q13432 240 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 C2orf76Q3KRA6 126 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 RAB12Q6IQ22 244 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 BRICD5Q6PL45 260 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 OR13F1Q8NGS4 319 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 SSMEM1Q8WWF3 244 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 COQ2Q96H96 371 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 ZNF714Q96N38 554 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 URM1Q9BTM9 101 aaKnown RBP14.47□□□□□ -0.09
COL7A1-205ENST00000465238 CHIAQ9BZP6 476 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 TNFRSF19Q9NS68 423 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 UBE2J1Q9Y385 318 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-205ENST00000465238 PEX16Q9Y5Y5 336 aa14.47□□□□□ -0.09
COL7A1-205ENST00000465238 MEIKINA0A087WXM9 373 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 IGHV1-69DA0A0B4J2H0 117 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 AIPO00170 330 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 NDUFA7O95182 113 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 IGHV1-69P01742 117 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 LSM3P62310 102 aaKnown RBP14.46□□□□□ -0.09
COL7A1-205ENST00000465238 MXD1Q05195 221 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 NCR3LG1Q68D85 454 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 PLPPR1Q8TBJ4 325 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 NEDD4LQ96PU5 975 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 FUNDC2Q9BWH2 189 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 TM2D1Q9BX74 207 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 NCOR1P1Q9H4R4 102 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 OR6C3Q9NZP0 311 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 C1RLQ9NZP8 487 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 RCC2Q9P258 522 aaKnown RBP14.46□□□□□ -0.09
COL7A1-205ENST00000465238 KIF25Q9UIL4 384 aa14.46□□□□□ -0.09
COL7A1-205ENST00000465238 VWFP04275 2813 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 C17orf98A8MV24 154 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 PDCD6O75340 191 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 GLAP06280 429 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 SLC2A2P11168 524 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-205ENST00000465238 DLX6P56179 175 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 ERVFRD-1P60508 538 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 GUCA2AQ02747 115 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 PRB3Q04118 309 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-205ENST00000465238 NKAPLQ5M9Q1 402 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 RSBN1Q5VWQ0 802 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-205ENST00000465238 SLC35E4Q6ICL7 350 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 TCF23Q7RTU1 214 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 PDZD9Q8IXQ8 264 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 ZNF565Q8N9K5 539 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 WFDC12Q8WWY7 111 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 CORO2AQ92828 525 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 GAL3ST2Q9H3Q3 398 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 HEXA-AS1Q9H8Q6 139 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 LIN7BQ9HAP6 207 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 TAS2R3Q9NYW6 316 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 FBLN5Q9UBX5 448 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 RAB22AQ9UL26 194 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 WNK1Q9H4A3 2382 aa14.45□□□□□ -0.1
COL7A1-205ENST00000465238 TMEM30CPA0ZSE6 113 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 RBP4P02753 201 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 CLEC2LP0C7M8 214 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 DLX1P56177 255 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 RELBQ01201 579 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 PAX5Q02548 391 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 OLFML2AQ68BL7 652 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 SIGIRRQ6IA17 410 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 C11orf42Q8N5U0 333 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 DYRK2Q92630 601 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 TNFRSF14Q92956 283 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 NICN1Q9BSH3 213 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 LPAR5Q9H1C0 372 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms