RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TNNC1P63316 161 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 PRDX1Q06830 199 aaKnown RBP0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 STX3Q13277 289 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 TRIP13Q15645 432 aaPredicted RBP0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 BSXQ3C1V8 233 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 PYCR3Q53H96 274 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 KRTCAP2Q8N6L1 136 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 FAM45AQ8TCE6 357 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 CASTOR1Q8WTX7 329 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 KCTD4Q8WVF5 259 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 TWIST2Q8WVJ9 160 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 OTUB2Q96DC9 234 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 REEP6Q96HR9 211 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 PRSS27Q9BQR3 290 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 TSSK6Q9BXA6 273 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 ULBP1Q9BZM6 244 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 SLC25A31Q9H0C2 315 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 ALX4Q9H161 411 aaPredicted RBP0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 OR52A5Q9H2C5 316 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 AGPAT3Q9NRZ7 376 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 STK38LQ9Y2H1 464 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 MTCH2Q9Y6C9 303 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 U3KQK5 164 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 VWDEQ8N2E2 1590 aa0.78□□□□□ -2.29
NUCKS1-202ENST00000464938 COL18A1P39060 1754 aa0.78□□□□□ -2.29
NUCKS1-202ENST00000464938 NLRC5Q86WI3 1866 aa0.78□□□□□ -2.29
NUCKS1-202ENST00000464938 VWA8A3KMH1 1905 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 I3L4J1 428 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 J3QLI3 93 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 POLR3GO15318 223 aaPredicted RBP0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 FGF16O43320 207 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 PSIP1O75475 530 aaKnown RBP0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 DEDDO75618 318 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 LDOC1O95751 146 aaPredicted RBP0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 LTAP01374 205 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 GP1BAP07359 652 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 SLC35E2BP0CK96 405 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF22P17026 224 aaPredicted RBP0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF3P17036 446 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 PSMB9P28065 219 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 OR2B6P58173 313 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 TPBGQ13641 420 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 BCL2A1Q16548 175 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 C10orf91Q5T1B1 145 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 HES3Q5TGS1 186 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 NXNL2Q5VZ03 156 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 ELP2Q6IA86 826 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 DGAT2L6Q6ZPD8 337 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 TMPPEQ6ZT21 453 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 AHSA2Q719I0 299 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 SSX7Q7RTT5 188 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 FAM19A3Q7Z5A8 133 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 HS3ST5Q8IZT8 346 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 MUC15Q8N387 334 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 SPERTQ8NA61 448 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 FER1L6-AS1Q8NA97 138 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 CD200R1Q8TD46 325 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 CLDN23Q96B33 292 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 C20orf166-AS1Q96NR2 134 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 SERPINB11Q96P15 392 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 ANAPC13Q9BS18 74 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 KRTAP4-1Q9BYQ7 146 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 IFT46Q9NQC8 304 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 RPUSD1Q9UJJ7 312 aaKnown RBP0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 POMPQ9Y244 141 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 SHANK3Q9BYB0 1731 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 NUP205Q92621 2012 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 CACNA1GO43497 2377 aa0.77□□□□□ -2.29
NUCKS1-202ENST00000464938 ADAMTSL1Q8N6G6 1762 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 DNMT1P26358 1616 aaKnown RBP0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 ABCB11O95342 1321 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 TRAV8-2A0A0B4J237 113 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 IGKV1-12A0A0C4DH73 117 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 A0A1W2PRG6 482 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 SDHAF1A6NFY7 115 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 J3QRE1 110 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 YKT6O15498 198 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 FABP7O15540 132 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 SYNGR1O43759 233 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF73O43830 326 aaPredicted RBP0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 SH2D1AO60880 128 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 IGKV1D-12P01611 117 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 TPM1P09493 284 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 SPNP16150 400 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 MAGEA6P43360 314 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 SLAMF1Q13291 335 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 OR4D1Q15615 310 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 TMEM249Q2WGJ8 235 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 LGALSLQ3ZCW2 172 aaPredicted RBP0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 OR10J3Q5JRS4 329 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 LAIR2Q6ISS4 152 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 SCXQ7RTU7 201 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 VN1R4Q7Z5H5 301 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 LRRC6Q86X45 466 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 NIT1Q86X76 327 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 C17orf78Q8N4C9 275 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 TRIML2Q8N7C3 387 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 GATD1Q8NB37 220 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 Q8NDZ9 215 aa0.76□□□□□ -2.29
NUCKS1-202ENST00000464938 OR11G2Q8NGC1 345 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms