RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 NRASP01111 189 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 GCGP01275 180 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 IFNA1P01562 189 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 AMBPP02760 352 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 TK1P04183 234 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 GZMBP10144 247 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 CD27P26842 260 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 BEND4Q6ZU67 534 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 P4HA3Q7Z4N8 544 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 TMEM217Q8N7C4 229 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 Q8NFD4 153 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 OR2AE1Q8NHA4 323 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 ZNF845Q96IR2 970 aaPredicted RBP6.28□□□□□ -1.4
USP48-206ENST00000464577 RAB40CQ96S21 281 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 NEU1Q99519 415 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 TPSD1Q9BZJ3 242 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 ZNF442Q9H7R0 627 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 CRLF2Q9HC73 371 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 P4HTMQ9NXG6 502 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 MYOTQ9UBF9 498 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 A0A0C4DFX4 3053 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 ADAMTS20P59510 1910 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 hCG_38984A0A1B0GV85 526 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 NPIPA2E9PIF3 369 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 NPIPA3F8WFD2 350 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 CST2P09228 141 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 WNT2P09544 360 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 BTF3P20290 206 aaKnown RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 PDLIM4P50479 330 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 FOXL2P58012 376 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 HNRNPKP61978 463 aaKnown RBP eCLIP6.27□□□□□ -1.41
USP48-206ENST00000464577 DAZAP2Q15038 168 aaPredicted RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 C4orf17Q53FE4 359 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 SPIN3Q5JUX0 258 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 FAM69BQ5VUD6 431 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 BRICD5Q6PL45 260 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 FIP1L1Q6UN15 594 aaKnown RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 ZNF818PQ6ZRF7 136 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 MRGPRGQ86SM5 289 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 THNSL2Q86YJ6 484 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 GAPTQ8N292 157 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 GPR137CQ8N3F9 429 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 OR1F12Q8NHA8 337 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 SPACA9Q96E40 222 aaPredicted RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 ACY3Q96HD9 319 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 ZNF385AQ96PM9 386 aaKnown RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 TMUB1Q9BVT8 246 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 RBM24Q9BX46 236 aaKnown RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 PARD6GQ9BYG4 376 aaPredicted RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 ULBP2Q9BZM5 246 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 Q9N2K0 584 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 TAAR3PQ9P1P4 343 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 LRFN1Q9P244 771 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 NAT8Q9UHE5 227 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 F5P12259 2224 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 IGHV1OR15-9A0A0B4J2B8 117 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 FER1L5A0AVI2 2057 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 OR6C6A6NF89 314 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 SLC22A20A6NK97 555 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 NAPSAO96009 420 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 PFN1P07737 140 aaKnown RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 CTXN2P0C2S0 81 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 RP1P56715 2156 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 NUTF2P61970 127 aaKnown RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 SERF2P84101 59 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 DLX2Q07687 328 aaPredicted RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 WDR25Q64LD2 544 aaPredicted RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 SLC25A24Q6NUK1 477 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 CYP2G1PQ6ZSU1 146 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 CENPVQ7Z7K6 275 aaPredicted RBP6.27□□□□□ -1.41
USP48-206ENST00000464577 ZNF295-AS1Q8N0V1 137 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 ZNF664Q8N3J9 261 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 EXTL1Q92935 676 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 PCDH15Q96QU1 1955 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 ZNF665Q9H7R5 613 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 RPRMQ9NS64 109 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 CLEC1BQ9P126 229 aa6.27□□□□□ -1.41
USP48-206ENST00000464577 KIR2DS1A0A191URI9 304 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 ZFP92A6NM28 416 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 KIAA1324LA8MWY0 1029 aaPredicted RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 TP53I11O14683 189 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 TCAPO15273 167 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 OR7C1O76099 320 aaPredicted RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 LCATP04180 440 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 KIR2DS4P43632 304 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 CLDN15P56746 228 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 COL10A1Q03692 680 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 HNF4GQ14541 408 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 KIR2DS1Q14954 304 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 ZNF726P1Q15940 193 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 MPV17LQ2QL34 196 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 NKAIN1Q4KMZ8 207 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 CDCP2Q5VXM1 449 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 NCR3LG1Q68D85 454 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms