RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 A0A0U1RQK1 487 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 MDFIC2A0A1B0GVS7 189 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 MEIOCA2RUB1 952 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 ZNF729A6NN14 1252 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 PDCD6O75340 191 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 CLPXO76031 633 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 GLAP06280 429 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 COX7A1P24310 79 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 CFPP27918 469 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 BAMBIQ13145 260 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 TIMM50Q3ZCQ8 353 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 HEPN1Q6WQI6 88 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 GDPGP1Q6ZNW5 385 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 OR13A1Q8NGR1 328 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 OR13D1Q8NGV5 346 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 ZDHHC16Q969W1 377 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 YIPF6Q96EC8 236 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 NEDD4LQ96PU5 975 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 URM1Q9BTM9 101 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 CENPOQ9BU64 300 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 PRDM13Q9H4Q3 707 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 RNF167Q9H6Y7 350 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 FBLN5Q9UBX5 448 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM96BQ9Y3D0 163 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 SESN1Q9Y6P5 492 aa11.84□□□□□ -0.51
SQSTM1-205ENST00000464493 KBTBD11-OT1A0A1B0GTJ5 212 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 NOTOA8MTQ0 251 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 AIPO00170 330 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 MMP23AO75900 390 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 MT-ND4P03905 459 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 SMIM18P0DKX4 95 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 CGB3P0DN86 165 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 CGB7P0DN87 165 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 CDK2P24941 298 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 SDC2P34741 201 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 SAA4P35542 130 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 GLP1RP43220 463 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 MIDNQ504T8 468 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 NKAPLQ5M9Q1 402 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 Q6YL49 198 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 ZNF497Q6ZNH5 498 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 NR2C2APQ86WQ0 139 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 ZDHHC22Q8N966 263 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 MRGPRDQ8TDS7 321 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 NICN1Q9BSH3 213 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 LPAR5Q9H1C0 372 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 ESM1Q9NQ30 184 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 ETAA1Q9NY74 926 aa11.83□□□□□ -0.52
SQSTM1-205ENST00000464493 A0A0A6YYD4 124 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 TRAV39A0A0B4J263 110 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 TMEM272A0A1B0GTI8 110 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 UBE2QL1A1L167 161 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 SMIM30A4D0T7 59 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 TRIM77I1YAP6 450 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 LDLRAD4O15165 306 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 AIREO43918 545 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 CA11O75493 328 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 GZMHP20718 246 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 OMGP23515 440 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 CHATP28329 748 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 BLVRBP30043 206 aaPredicted RBP11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 LGALS4P56470 323 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 PRAMEF5Q5TYX0 476 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 OR52W1Q6IF63 320 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 FAM89BQ8N5H3 189 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 OR11H6Q8NGC7 330 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 CCDC107Q8WV48 283 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 TMEM158Q8WZ71 300 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 TMEM133Q9H2Q1 129 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 LIN7BQ9HAP6 207 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 CALYQ9NYX4 217 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 RAB22AQ9UL26 194 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 COL6A5A8TX70 2615 aa11.82□□□□□ -0.52
SQSTM1-205ENST00000464493 HOXA3O43365 443 aaPredicted RBP11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 PAHP00439 452 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 ARG1P05089 322 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 FBP1P09467 338 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 SLC2A2P11168 524 aaPredicted RBP11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 MXD1Q05195 221 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 DYNC1I2Q13409 638 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 SLC9A3R2Q15599 337 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 C6orf201Q7Z4U5 140 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 GAPTQ8N292 157 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 DYRK2Q92630 601 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 DUX5Q96PT3 197 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 SULT4A1Q9BR01 284 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 FAAP24Q9BTP7 215 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 CLEC7AQ9BXN2 247 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 MRPS26Q9BYN8 205 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 LINC00574Q9H8X3 128 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 PLEKHJ1Q9NW61 149 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 TRAPPC2LQ9UL33 140 aa11.81□□□□□ -0.52
SQSTM1-205ENST00000464493 IGHV2-26A0A0B4J1V2 119 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 A0A0B4J203 849 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 DNAJC9-AS1A6NH13 148 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 RNF212BA8MTL3 300 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms