RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZNF407Q9C0G0 2248 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 ARAP3Q8WWN8 1544 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 MYO15BQ96JP2 1530 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 YLPM1P49750 1951 aaKnown RBP1.96□□□□□ -2.1
CLK1-208ENST00000464454 A0A1B0GX12 115 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 OR5H14A6NHG9 310 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 H3BMM0 161 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 SLC31A1O15431 190 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 PLXNB1O43157 2135 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 PSCAO43653 123 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 TNFAIP8O95379 198 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 ZNF3P17036 446 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 AKR1C4P17516 323 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 MAGEA6P43360 314 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 HSPA13P48723 471 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 OR2B6P58173 313 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 MEF2BQ02080 365 aaPredicted RBP1.95□□□□□ -2.1
CLK1-208ENST00000464454 DHRS2Q13268 280 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 SYCP1Q15431 976 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 MMDQ15546 238 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 ZCWPW2Q504Y3 356 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 OR10J3Q5JRS4 329 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 HCP5Q6MZN7 132 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 SYCE1Q8N0S2 351 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 FER1L6-AS1Q8NA97 138 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 RORBQ92753 470 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 UBE2WQ96B02 151 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 CMBLQ96DG6 245 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 EBPLQ9BY08 206 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 OR52A5Q9H2C5 316 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 BTRCQ9Y297 605 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 CARHSP1Q9Y2V2 147 aaKnown RBP1.95□□□□□ -2.1
CLK1-208ENST00000464454 KIAA0232Q92628 1395 aa1.95□□□□□ -2.1
CLK1-208ENST00000464454 A6NED7 52 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 HSBP1L1C9JCN9 74 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 TMEM250H0YL14 139 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 SULT1C2O00338 296 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 GYPCP04921 128 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 SLC35E2BP0CK96 405 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 LGALS3P17931 250 aaKnown RBP1.94□□□□□ -2.1
CLK1-208ENST00000464454 ATF1P18846 271 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 OR10A3P58181 314 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 RAB31Q13636 194 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 ANGPT1Q15389 498 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 TMEM249Q2WGJ8 235 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 LAIR2Q6ISS4 152 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 TMPPEQ6ZT21 453 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 OR5P3Q8WZ94 311 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 GTF2H4Q92759 462 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 PPWD1Q96BP3 646 aaKnown RBP1.94□□□□□ -2.1
CLK1-208ENST00000464454 CCDC127Q96BQ5 260 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 DDIT4LQ96D03 193 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 REEP6Q96HR9 211 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 HBEGFQ99075 208 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 OR2D2Q9H210 308 aa1.94□□□□□ -2.1
CLK1-208ENST00000464454 TBL2Q9Y4P3 447 aaKnown RBP1.94□□□□□ -2.1
CLK1-208ENST00000464454 TRBV24-1A0A075B6N3 115 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 ERICH2A1L162 156 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 FGF16O43320 207 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 NEMFO60524 1076 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 GUSBP08236 651 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 CTLA4P16410 223 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 C1QTNF8P60827 252 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 ZBTB6Q15916 424 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 PYCR3Q53H96 274 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 SSX7Q7RTT5 188 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 MUC7Q8TAX7 377 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 SPPL2BQ8TCT7 592 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 PDCD6IPQ8WUM4 868 aaKnown RBP1.93□□□□□ -2.1
CLK1-208ENST00000464454 HIGD2AQ9BW72 106 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 BCL2L14Q9BZR8 327 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 FBXL15Q9H469 300 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 COMMD9Q9P000 198 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 U3KQK5 164 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 RAB3GAP2Q9H2M9 1393 aa1.93□□□□□ -2.1
CLK1-208ENST00000464454 A0A1B0GU33 70 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 ARGFXA6NJG6 315 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 E7EQL1 145 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 POLR3GO15318 223 aaPredicted RBP1.92□□□□□ -2.1
CLK1-208ENST00000464454 OPN1SWP03999 348 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 PSKH1P11801 424 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 CASQ1P31415 396 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 INPP1P49441 399 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 TNFRSF9Q07011 255 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 PAFAH1B3Q15102 231 aaKnown RBP1.92□□□□□ -2.1
CLK1-208ENST00000464454 SMARCD3Q6STE5 483 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 Q8NAQ8 132 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 KCTD4Q8WVF5 259 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 B9D2Q9BPU9 175 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 TSSK6Q9BXA6 273 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 OR5V1Q9UGF6 321 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 NUP153P49790 1475 aaKnown RBP1.92□□□□□ -2.1
CLK1-208ENST00000464454 NLRC5Q86WI3 1866 aa1.92□□□□□ -2.1
CLK1-208ENST00000464454 MAP3K19Q56UN5 1328 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 COL5A1P20908 1838 aaPredicted RBP1.91□□□□□ -2.1
CLK1-208ENST00000464454 IGLV10-54A0A075B6I4 117 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 IGKV1D-37A0A075B6S9 117 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 A0A1B0GTI1 187 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 EFCAB9A8MZ26 197 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 C8orf87E5RJ46 101 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms