RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 ZNF691Q5VV52 312 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 RSBN1Q5VWQ0 802 aaPredicted RBP17.81■□□□□ 0.44
USP4-208ENST00000464168 SERPINA12Q8IW75 414 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 STPG2Q8N412 459 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 TFAP2CQ92754 450 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 RAX2Q96IS3 184 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 IMPAD1Q9NX62 359 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 ZMAT5Q9UDW3 170 aaKnown RBP17.81■□□□□ 0.44
USP4-208ENST00000464168 PAX5Q02548 391 aa17.8■□□□□ 0.44
USP4-208ENST00000464168 EBI3Q14213 229 aa17.8■□□□□ 0.44
USP4-208ENST00000464168 SLC16A12Q6ZSM3 486 aa17.8■□□□□ 0.44
USP4-208ENST00000464168 PARP16Q8N5Y8 322 aa17.8■□□□□ 0.44
USP4-208ENST00000464168 PLPPR1Q8TBJ4 325 aa17.8■□□□□ 0.44
USP4-208ENST00000464168 MRGPRDQ8TDS7 321 aa17.8■□□□□ 0.44
USP4-208ENST00000464168 TRAV39A0A0B4J263 110 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 SAC3D1A6NKF1 404 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 CCL24O00175 119 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 NHLRC4P0CG21 123 aaPredicted RBP17.79■□□□□ 0.44
USP4-208ENST00000464168 SNRPGP62308 76 aaKnown RBP17.79■□□□□ 0.44
USP4-208ENST00000464168 ZSCAN26Q16670 478 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 FOXRED2Q8IWF2 684 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 PXT1Q8NFP0 134 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 OR10A7Q8NGE5 316 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 OR10X1Q8NGY0 326 aa17.79■□□□□ 0.44
USP4-208ENST00000464168 EXOGQ9Y2C4 368 aaKnown RBP17.79■□□□□ 0.44
USP4-208ENST00000464168 A0A1W2PPE3 182 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 ZFPL1O95159 310 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 SSTR5P35346 364 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 IL13RA2Q14627 380 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 C1orf146Q5VVC0 180 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 MEDAGQ5VYS4 303 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 LPCAT4Q643R3 524 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 TEX38Q6PEX7 206 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 LHFPL3Q86UP9 236 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 LGALS12Q96DT0 336 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 DCLRE1BQ9H816 532 aa17.78■□□□□ 0.44
USP4-208ENST00000464168 ISG20L2Q9H9L3 353 aaKnown RBP17.78■□□□□ 0.44
USP4-208ENST00000464168 LSM4Q9Y4Z0 139 aaKnown RBP17.78■□□□□ 0.44
USP4-208ENST00000464168 HSD17B6O14756 317 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 RAMP3O60896 148 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 RPLP1P05386 114 aaKnown RBP17.77■□□□□ 0.44
USP4-208ENST00000464168 KCNJ3P48549 501 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 ZNF816Q0VGE8 651 aaPredicted RBP17.77■□□□□ 0.44
USP4-208ENST00000464168 GALEQ14376 348 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 PNLIPRP3Q17RR3 467 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 PIGYQ3MUY2 71 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 Q8NFD4 153 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 EAF1Q96JC9 268 aaPredicted RBP17.77■□□□□ 0.44
USP4-208ENST00000464168 ZNF581Q9P0T4 197 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 AASSQ9UDR5 926 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 U3KQK5 164 aa17.77■□□□□ 0.44
USP4-208ENST00000464168 IGHV3-72A0A0B4J1Y9 119 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 IGHV1-3A0A0C4DH29 117 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 E9PI62 339 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 GABRPO00591 440 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 GAPDHP04406 335 aaKnown RBP17.76■□□□□ 0.43
USP4-208ENST00000464168 GPR12P47775 334 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 REG1BP48304 166 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 LUMP51884 338 aaPredicted RBP17.76■□□□□ 0.43
USP4-208ENST00000464168 GP2P55259 537 aaKnown RBP17.76■□□□□ 0.43
USP4-208ENST00000464168 RAB25P57735 213 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 ZNF529Q6P280 563 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 LCNL1Q6ZST4 164 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 MOB3BQ86TA1 216 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 TGIF2LXQ8IUE1 241 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 Q8N6K4 173 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 OR10K1Q8NGX5 313 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 TNFAIP8L1Q8WVP5 186 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 PDCD1LG2Q9BQ51 273 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 ALG8Q9BVK2 526 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 ABCG5Q9H222 651 aa17.76■□□□□ 0.43
USP4-208ENST00000464168 TMEM212A6NML5 194 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 NCBP2LA6PVI3 153 aaKnown RBP17.75■□□□□ 0.43
USP4-208ENST00000464168 AP4M1O00189 453 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 CCRL2O00421 344 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 ALPLP05186 524 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 RPSAP08865 295 aaKnown RBP17.75■□□□□ 0.43
USP4-208ENST00000464168 DEFB136Q30KP8 78 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 NKAPLQ5M9Q1 402 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 ASCL4Q6XD76 172 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 SATL1Q86VE3 508 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 SYS1Q8N2H4 156 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 Q8N9W7 124 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 OR51A2Q8NGJ7 313 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 OR5AK2Q8NH90 309 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 MRPL48Q96GC5 212 aaKnown RBP17.75■□□□□ 0.43
USP4-208ENST00000464168 DPCDQ9BVM2 203 aaPredicted RBP17.75■□□□□ 0.43
USP4-208ENST00000464168 PLSCR3Q9NRY6 295 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 DHDHQ9UQ10 334 aa17.75■□□□□ 0.43
USP4-208ENST00000464168 RAB3AP20336 220 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 GZMHP20718 246 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 KIR2DS1Q14954 304 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 RSU1Q15404 277 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 IZUMO1Q8IYV9 350 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 RNF152Q8N8N0 203 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 SUMF2Q8NBJ7 301 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 GPER1Q99527 375 aa17.74■□□□□ 0.43
USP4-208ENST00000464168 LIN7CQ9NUP9 197 aaKnown RBP17.74■□□□□ 0.43
USP4-208ENST00000464168 CDX1P47902 265 aaPredicted RBP17.73■□□□□ 0.43
USP4-208ENST00000464168 FOXE3Q13461 319 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms