RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 J3QR06 171 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 RSBN1Q5VWQ0 802 aaPredicted RBP15.04■□□□□ -0
SF3A1-205ENST00000463818 MRGPRDQ8TDS7 321 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 FBLIM1Q8WUP2 373 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 LEAP2Q969E1 77 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 METTL9Q9H1A3 318 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 TMEM138Q9NPI0 162 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 ZNF581Q9P0T4 197 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 CLEC2DQ9UHP7 191 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 ST3GAL6Q9Y274 331 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 ZNF281Q9Y2X9 895 aa15.04■□□□□ -0
SF3A1-205ENST00000463818 TRAV39A0A0B4J263 110 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 NPIPB11E5RHQ5 1161 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 IL1AP01583 271 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 AMY1AP04745 511 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 AMY2AP04746 511 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 ZNF93P35789 620 aaPredicted RBP15.03■□□□□ -0
SF3A1-205ENST00000463818 KCNJ3P48549 501 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 RIPK1Q13546 671 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 LTC4SQ16873 150 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 DHRSXQ8N5I4 330 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 SUMF2Q8NBJ7 301 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 SETD9Q8NE22 299 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 RPEQ96AT9 228 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 ORAI1Q96D31 301 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 DPCDQ9BVM2 203 aaPredicted RBP15.03■□□□□ -0
SF3A1-205ENST00000463818 VCXQ9H320 206 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 DIMT1Q9UNQ2 313 aaKnown RBP15.03■□□□□ -0
SF3A1-205ENST00000463818 PSG11Q9UQ72 335 aa15.03■□□□□ -0
SF3A1-205ENST00000463818 TCRBV4S1A1TA0A5B7 111 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 IRGMA1A4Y4 181 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A18PA6NE21 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A16PA6NEW6 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A20PA6NIJ5 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A9PA6NNJ1 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A12PA8MX19 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A5PA8MXJ8 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A15PP0C7V4 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A13PP0C7W8 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A14PP0C7W9 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM90A24PP0C7X0 464 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 FAM106CPP0CH98 169 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 BDKRB2P30411 391 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 CAPGP40121 348 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 PPP3R1P63098 170 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 PAX5Q02548 391 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 TCTEX1D4Q5JR98 221 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 C9orf152Q5JTZ5 239 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 DDI2Q5TDH0 399 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 THNSL2Q86YJ6 484 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 OSR2Q8N2R0 312 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 OR13C5Q8NGS8 318 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 OR52N1Q8NH53 320 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 NRG4Q8WWG1 115 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 CYGBQ8WWM9 190 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 TOMM40LQ969M1 308 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 S100A13Q99584 98 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 IL36GQ9NZH8 169 aa15.02■□□□□ -0
SF3A1-205ENST00000463818 EXOSC1Q9Y3B2 195 aaKnown RBP15.02■□□□□ -0
SF3A1-205ENST00000463818 AMMECR1Q9Y4X0 333 aaPredicted RBP15.02■□□□□ -0
SF3A1-205ENST00000463818 PLXNB1O43157 2135 aa15.02□□□□□ -0.01
SF3A1-205ENST00000463818 M0QZK8 103 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 OR7C1O76099 320 aaPredicted RBP15.01□□□□□ -0.01
SF3A1-205ENST00000463818 LALBAP00709 142 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 CSTBP04080 98 aaKnown RBP15.01□□□□□ -0.01
SF3A1-205ENST00000463818 MYL12AP19105 171 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 NHLRC3Q5JS37 347 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 OR10A7Q8NGE5 316 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 TFAP2CQ92754 450 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 GHSRQ92847 366 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 SMIM19Q96E16 107 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 TMEM80Q96HE8 168 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 IFT22Q9H7X7 185 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 PCDHB16Q9NRJ7 776 aa15.01□□□□□ -0.01
SF3A1-205ENST00000463818 CHCHD3Q9NX63 227 aaKnown RBP15.01□□□□□ -0.01
SF3A1-205ENST00000463818 TRBV5-5A0A0J9YX44 114 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 GEMIN2O14893 280 aaKnown RBP15□□□□□ -0.01
SF3A1-205ENST00000463818 SNRNP70P08621 437 aaKnown RBP15□□□□□ -0.01
SF3A1-205ENST00000463818 IGFBP3P17936 291 aaPredicted RBP15□□□□□ -0.01
SF3A1-205ENST00000463818 GZMHP20718 246 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 RBM11P57052 281 aaKnown RBP15□□□□□ -0.01
SF3A1-205ENST00000463818 DIAPH2-AS1Q14236 149 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 DMKNQ6E0U4 476 aaPredicted RBP15□□□□□ -0.01
SF3A1-205ENST00000463818 C10orf99Q6UWK7 81 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 SLC16A12Q6ZSM3 486 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 DRAM1Q8N682 238 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 WFDC9Q8NEX5 89 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 GGHQ92820 318 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 MYDGFQ969H8 173 aa15□□□□□ -0.01
SF3A1-205ENST00000463818 PAK1IP1Q9NWT1 392 aaPredicted RBP15□□□□□ -0.01
SF3A1-205ENST00000463818 TSSC4Q9Y5U2 329 aaPredicted RBP15□□□□□ -0.01
SF3A1-205ENST00000463818 GPX5O75715 221 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 GNAO1P09471 354 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 SERPINA2P20848 420 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 SSTR5P35346 364 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 GNG10P50151 68 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 MADCAM1Q13477 382 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 MED21Q13503 144 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 REC114Q7Z4M0 266 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 ZFP41Q8N8Y5 198 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms