RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TRIM64CA6NLI5 447 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 CLPXO76031 633 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 CDK2P24941 298 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 RPS27AP62979 156 aaKnown RBP14.36□□□□□ -0.11
VPS52-214ENST00000463486 PRAMEF5Q5TYX0 476 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 ZNF626Q68DY1 528 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 LHFPL4Q7Z7J7 247 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 NR2C2APQ86WQ0 139 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 DYNAPQ8N1N2 210 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 MEGF9Q9H1U4 602 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 ZMAT3Q9HA38 289 aaKnown RBP14.36□□□□□ -0.11
VPS52-214ENST00000463486 OR6C3Q9NZP0 311 aa14.36□□□□□ -0.11
VPS52-214ENST00000463486 MEIKINA0A087WXM9 373 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 A0A0A6YYD4 124 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 TRAV39A0A0B4J263 110 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 KBTBD11-OT1A0A1B0GTJ5 212 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 TMEM89A2RUT3 159 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 NPIPB11E5RHQ5 1161 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 LDLRAD4O15165 306 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 BPNT1O95861 308 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 MT-ND4P03905 459 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 FBP1P09467 338 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 OMGP23515 440 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 PAX6P26367 422 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 CFPP27918 469 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 P2RY14Q15391 338 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 ATAD3CQ5T2N8 411 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 C22orf42Q6IC83 251 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 RAB12Q6IQ22 244 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 ZNF497Q6ZNH5 498 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 TRAPPC6BQ86SZ2 158 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 BEND2Q8NDZ0 799 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 OR13D1Q8NGV5 346 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 KCNG3Q8TAE7 436 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 SSMEM1Q8WWF3 244 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 DYRK2Q92630 601 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 TM2D1Q9BX74 207 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 CHIAQ9BZP6 476 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 CST11Q9H112 138 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 GAL3ST2Q9H3Q3 398 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 SPACA1Q9HBV2 294 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 TXNL4BQ9NX01 149 aaKnown RBP14.35□□□□□ -0.11
VPS52-214ENST00000463486 FAM96BQ9Y3D0 163 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 POMT1Q9Y6A1 747 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 V9GY05 133 aa14.35□□□□□ -0.11
VPS52-214ENST00000463486 A0A087X0M5 115 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 IGHV2-26A0A0B4J1V2 119 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 A0A1B0GX30 115 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 ZNF729A6NN14 1252 aaPredicted RBP14.34□□□□□ -0.11
VPS52-214ENST00000463486 FOXI3A8MTJ6 420 aaPredicted RBP14.34□□□□□ -0.11
VPS52-214ENST00000463486 MPIG6BO95866 241 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 GLAP06280 429 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 FUT3P21217 361 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 CD34P28906 385 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 OR10A3P58181 314 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 NEDD8Q15843 81 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 C16orf87Q6PH81 154 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 FAM89BQ8N5H3 189 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 TSPAN14Q8NG11 270 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 PIFOQ8TCI5 191 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 TAF15Q92804 592 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS52-214ENST00000463486 KIRREL1Q96J84 757 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 NICN1Q9BSH3 213 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 LPAR5Q9H1C0 372 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 OR51E2Q9H255 320 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 ZNF696Q9H7X3 374 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 CALYQ9NYX4 217 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 FBLN5Q9UBX5 448 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 STUB1Q9UNE7 303 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 PEX16Q9Y5Y5 336 aa14.34□□□□□ -0.11
VPS52-214ENST00000463486 PDCD6O75340 191 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 TNFAIP8O95379 198 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 IGLV1-47P01700 117 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 CHATP28329 748 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 COMPP49747 757 aaPredicted RBP14.33□□□□□ -0.12
VPS52-214ENST00000463486 CLDN12P56749 244 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 PLA2G7Q13093 441 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 RTN4RL2Q86UN3 420 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 ZNF565Q8N9K5 539 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 OR51D1Q8NGF3 324 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 MRGPRDQ8TDS7 321 aa14.33□□□□□ -0.12
VPS52-214ENST00000463486 A0A087WXM4 84 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 TMEM30CPA0ZSE6 113 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 C15orf65H3BRN8 121 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 IL1AP01583 271 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 ARSBP15848 533 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 SSTR5P35346 364 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 GLP1RP43220 463 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 PSMD7P51665 324 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 RAB11BQ15907 218 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 C2orf76Q3KRA6 126 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 OR2W3Q7Z3T1 314 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 ABHD12Q8N2K0 398 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 OR4P4Q8NGL7 312 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 FAM3DQ96BQ1 224 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 CLEC7AQ9BXN2 247 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 TMEM59Q9BXS4 323 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 PLGRKTQ9HBL7 147 aa14.32□□□□□ -0.12
VPS52-214ENST00000463486 ZNF286AQ9HBT8 521 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms