RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 LDLRAD3Q86YD5 345 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 C15orf54Q8N8G6 183 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 TMEM178AQ8NBL3 297 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 ZBTB34Q8NCN2 500 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 OR2M7Q8NG81 312 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 OR5D13Q8NGL4 314 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 OR1J1Q8NGS3 322 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 AKR7LQ8NHP1 331 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 ROBO4Q8WZ75 1007 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 PSMF1Q92530 271 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 EXTL1Q92935 676 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 RELTQ969Z4 430 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 MSI2Q96DH6 328 aaKnown RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 RBMXL1Q96E39 390 aaKnown RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 RRNAD1Q96FB5 475 aaKnown RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 THOC3Q96J01 351 aaKnown RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 ALKBH3Q96Q83 286 aaPredicted RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 RAB40CQ96S21 281 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 NKX3-1Q99801 234 aaPredicted RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 NRIP2Q9BQI9 281 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 SULT4A1Q9BR01 284 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 SOX7Q9BT81 388 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 SPRY4Q9C004 299 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 HRH4Q9H3N8 390 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 ZNF703Q9H7S9 590 aaPredicted RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 AKIRIN1Q9H9L7 192 aaPredicted RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 Q9N2K0 584 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 OR2S2Q9NQN1 319 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 BIN3Q9NQY0 253 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 OR5AC2Q9NZP5 309 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 FBXL17Q9UF56 701 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 LSM5Q9Y4Y9 91 aaKnown RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 PTPN13Q12923 2485 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 NAV2Q8IVL1 2488 aa4.05□□□□□ -1.76
VPS72-203ENST00000463470 PRRC2CQ9Y520 2896 aaKnown RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 PHF3Q92576 2039 aaKnown RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 USP9YO00507 2555 aaPredicted RBP4.05□□□□□ -1.76
VPS72-203ENST00000463470 LRBAP50851 2863 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 IGKV1-27A0A075B6S5 117 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 A0A1B0GU03 582 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 PMS2P1A4D2B8 440 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 TMEM210A6NLX4 147 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 FAM90A26D6RGX4 464 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 E9PLN8 166 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 H0Y980 276 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 PHF1O43189 567 aaPredicted RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 SPRY1O43609 319 aaPredicted RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 ANGPTL7O43827 346 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 NME2P1O60361 137 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 PITX3O75364 302 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 NDUFS6O75380 124 aaKnown RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 TUSC2O75896 110 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 MT-CO3P00414 261 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 PRH1P02810 166 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 CELA2AP08217 269 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 SFTA3P0C7M3 94 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 FOLR2P14207 255 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 PI3P19957 117 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 NME2P22392 152 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 UCP1P25874 307 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 TAGLN2P37802 199 aaKnown RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 RFC3P40938 356 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 CAMLGP49069 296 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 HOXA1P49639 335 aaPredicted RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 LHX2P50458 406 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 ARHGDIBP52566 201 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 CLDN18P56856 261 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 TAS2R30P59541 319 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 RPL23AP62750 156 aaKnown RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 S100A12P80511 92 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 ARF1P84077 181 aaKnown RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 TLE4Q04727 773 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 PRDX4Q13162 271 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 RHEBQ15382 184 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 OR1C1Q15619 314 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 GABRA6Q16445 453 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 TBC1D28Q2M2D7 210 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 SMUG1Q53HV7 270 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 SPIN3Q5JUX0 258 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 AVPI1Q5T686 147 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 TSPO2Q5TGU0 170 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 ZNF468Q5VIY5 522 aaPredicted RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 RPL7L1Q6DKI1 246 aaKnown RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 Q6ZRG5 221 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 STX12Q86Y82 276 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 FAM219AQ8IW50 185 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 PUSL1Q8N0Z8 303 aaKnown RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 LINC00528Q8N1L1 170 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 OR2C3Q8N628 320 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 ZFP62Q8NB50 900 aaPredicted RBP4.04□□□□□ -1.76
VPS72-203ENST00000463470 BHLHE23Q8NDY6 225 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 OR10Z1Q8NGY1 313 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 OR2AE1Q8NHA4 323 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 OR10J5Q8NHC4 309 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 NEK7Q8TDX7 302 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 GLYATL2Q8WU03 294 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 NINJ1Q92982 152 aa4.04□□□□□ -1.76
VPS72-203ENST00000463470 LSM10Q969L4 123 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms