RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 COPS3Q9UNS2 423 aa12.49□□□□□ -0.41
SND1-203ENST00000463020 IGHV2-26A0A0B4J1V2 119 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 TMEM269A0A1B0GVZ9 245 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 hCG_1809904A0A1W2PP81 198 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 A0A1W2PR64 198 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 A0A1W2PRV1 198 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 J3QLW9 94 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 MAGEB4O15481 346 aaPredicted RBP12.48□□□□□ -0.41
SND1-203ENST00000463020 LALBAP00709 142 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 SERPINA3P01011 423 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 NRASP01111 189 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
SND1-203ENST00000463020 CLEC2LP0C7M8 214 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 ZNF19P17023 458 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 GBX2P52951 348 aaPredicted RBP12.48□□□□□ -0.41
SND1-203ENST00000463020 EDDM3BP56851 147 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 RIPPLY1Q0D2K3 151 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 ABCA11PQ4W5N1 156 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 TMEM42Q69YG0 159 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 CENPVQ7Z7K6 275 aaPredicted RBP12.48□□□□□ -0.41
SND1-203ENST00000463020 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 SLC35F2Q8IXU6 374 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 MS4A15Q8N5U1 240 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 ASCC1Q8N9N2 400 aaKnown RBP12.48□□□□□ -0.41
SND1-203ENST00000463020 OR4P4Q8NGL7 312 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 ACOT12Q8WYK0 555 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 ISG20L2Q9H9L3 353 aaKnown RBP12.48□□□□□ -0.41
SND1-203ENST00000463020 SLC22A13Q9Y226 551 aa12.48□□□□□ -0.41
SND1-203ENST00000463020 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
SND1-203ENST00000463020 TTRP02766 147 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 CHRM2P08172 466 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 MYL9P24844 172 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 MPZP25189 248 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 PTBP1P26599 531 aaKnown RBP eCLIP12.47□□□□□ -0.413e-9■■■■□ 22.1
SND1-203ENST00000463020 MTNR1BP49286 362 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 OR12D2P58182 307 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 EDDM3AQ14507 147 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 KHDC1LQ5JSQ8 128 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 NKAPLQ5M9Q1 402 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 ZNF684Q5T5D7 378 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 FAM131AQ6UXB0 335 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 SYS1Q8N2H4 156 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 GDPD1Q8N9F7 314 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 OR52N4Q8NGI2 321 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 DIRAS2Q96HU8 199 aa12.47□□□□□ -0.41
SND1-203ENST00000463020 IGKV1-27A0A075B6S5 117 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 A0A1B0GTI1 187 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 A0A1W2PQL4 384 aaPredicted RBP12.46□□□□□ -0.41
SND1-203ENST00000463020 FAM172BPA6NC97 362 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 FABP12A6NFH5 140 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 RBP4P02753 201 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 GDNFP39905 211 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 ZNF85Q03923 595 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 TPRA1Q86W33 373 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 LAX1Q8IWV1 398 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 TRMT10AQ8TBZ6 339 aaKnown RBP12.46□□□□□ -0.41
SND1-203ENST00000463020 C4orf36Q96KX1 117 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 ZNF714Q96N38 554 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 MTCH1Q9NZJ7 389 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 LAMP5Q9UJQ1 280 aa12.46□□□□□ -0.41
SND1-203ENST00000463020 DHRS3O75911 302 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 ALDOBP05062 364 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 CD1AP06126 327 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 SCN1BQ07699 218 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 MINOS1Q5TGZ0 78 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 ZNF573Q86YE8 665 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 EGFL6Q8IUX8 553 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 ZNF676Q8N7Q3 588 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 HAVCR2Q8TDQ0 301 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 SLAMF9Q96A28 289 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
SND1-203ENST00000463020 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 TMEM133Q9H2Q1 129 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 GAR1Q9NY12 217 aaKnown RBP12.45□□□□□ -0.42
SND1-203ENST00000463020 NUFIP1Q9UHK0 495 aaKnown RBP12.45□□□□□ -0.42
SND1-203ENST00000463020 SESN1Q9Y6P5 492 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 MINOS1-NBL1R4GNA1 71 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 V9GYS6 101 aa12.45□□□□□ -0.42
SND1-203ENST00000463020 H3BSH0 61 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 OGG1O15527 345 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 PSPNO60542 156 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 CALCBP10092 127 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 AZGP1P25311 298 aaKnown RBP12.44□□□□□ -0.42
SND1-203ENST00000463020 MRPL28Q13084 256 aaKnown RBP12.44□□□□□ -0.42
SND1-203ENST00000463020 CCDC58Q4VC31 144 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 PYDC2Q56P42 97 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 CLVS2Q5SYC1 327 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 PRAMEF5Q5TYX0 476 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
SND1-203ENST00000463020 TMEM91Q6ZNR0 172 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 RNF144BQ7Z419 303 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 CEACAM19Q7Z692 300 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 ZNF329Q86UD4 541 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 OR14K1Q8NGZ2 314 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 DUX3Q96PT4 197 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 MNTQ99583 582 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 SRRQ9GZT4 340 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms