RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	PIGY	Q3MUY2	71 aa		10.15	□□□□□ -0.79
RBM39-223	ENST00000463004	GLCCI1	Q86VQ1	547 aa		10.15	□□□□□ -0.79
RBM39-223	ENST00000463004	TMEM171	Q8WVE6	324 aa		10.15	□□□□□ -0.79
RBM39-223	ENST00000463004	TUBD1	Q9UJT1	453 aa		10.15	□□□□□ -0.79
RBM39-223	ENST00000463004	NCOR1	O75376	2440 aa		10.15	□□□□□ -0.79
RBM39-223	ENST00000463004		A0A1B0GTI1	187 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	DEFA4	P12838	97 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	MMP9	P14780	707 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	PSMB3	P49720	205 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	RPS11	P62280	158 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	UBE2V2	Q15819	145 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	FOXL2NB	Q6ZUU3	175 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	TMPRSS13	Q9BYE2	586 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.14	□□□□□ -0.79
RBM39-223	ENST00000463004		A0A1B0GU03	582 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	TMEM8B	A6NDV4	472 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	MPC2	O95563	127 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF66	Q6ZN08	573 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	LYG1	Q8N1E2	194 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	RGP1	Q92546	391 aa	Predicted RBP	10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	S100PBP	Q96BU1	408 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	OR2D2	Q9H210	308 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	RCL1	Q9Y2P8	373 aa	Known RBP	10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	IGKV1D-43	A0A0B4J1Z2	117 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004		A0A0G2JK05	382 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	EFNA2	O43921	213 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	H2AFB1	P0C5Y9	115 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004		Q0VFX4	171 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	CLEC18B	Q6UXF7	455 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	TEX29	Q8N6K0	151 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	TMEM217	Q8N7C4	229 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	ST8SIA2	Q92186	375 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	SLC2A9	Q9NRM0	540 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	KLK13	Q9UKR3	277 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	FAM96B	Q9Y3D0	163 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	KPTN	Q9Y664	436 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	FANCM	Q8IYD8	2048 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004		E9PLN8	166 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	OR5AC1	P0C628	307 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	P2RY1	P47900	373 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	RAB5B	P61020	215 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	ZIC4	Q8N9L1	334 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF680	Q8NEM1	530 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	VKORC1	Q9BQB6	163 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	MSL2	Q9HCI7	577 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	KCNK7	Q9Y2U2	307 aa		10.14	□□□□□ -0.79
RBM39-223	ENST00000463004	PLXNB3	Q9ULL4	1909 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	CDRT15L2	A8MXV6	281 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	C3orf80	F5H4A9	247 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	SMLR1	H3BR10	107 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	ACKR3	P25106	362 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	OR8G2P	Q6IF36	304 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004		Q6ZS92	163 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	TMEM104	Q8NE00	496 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	GTF3A	Q92664	365 aa	Known RBP	10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	KCNK15	Q9H427	330 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	IQCF6	A8MYZ5	107 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	TNFSF12	O43508	249 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	SMPD2	O60906	423 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	KCNRG	Q8N5I3	272 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	CHAC2	Q8WUX2	184 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNRF4	Q8WWF5	429 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	MS4A3	Q96HJ5	214 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004		Q9N2K0	584 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	MFNG	O00587	321 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	GPR37	O15354	613 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	DAO	P14920	347 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	MUC1	P15941	1255 aa	Predicted RBP	10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	BPIFB3	P59826	476 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	PDCD1	Q15116	288 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004		Q3ZCU0	254 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	FAM74A1	Q5RGS3	127 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	OR13D1	Q8NGV5	346 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	OR2V2	Q96R30	315 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	C1RL	Q9NZP8	487 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	SPTA1	P02549	2419 aa		10.13	□□□□□ -0.79
RBM39-223	ENST00000463004	BRS3	P32247	399 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	C17orf107	Q6ZR85	190 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	TBC1D26	Q86UD7	250 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	FAM216A	Q8WUB2	273 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	IL22RA2	Q969J5	263 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	TMEM165	Q9HC07	324 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	PLSCR4	Q9NRQ2	329 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	RAB19	A4D1S5	217 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	TMPRSS2	O15393	492 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	IGHV1-2	P23083	117 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	S100A2	P29034	98 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	HIST3H3	Q16695	136 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	SOHLH1	Q5JUK2	328 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	CLLU1	Q5K131	121 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	CCDC144NL	Q6NUI1	221 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	IGFL3	Q6UXB1	125 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	BORCS7	Q96B45	105 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	GPR132	Q9UNW8	380 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	ATF4	P18848	351 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	F2R	P25116	425 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	B3GALT5-AS1	P59052	145 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	DOLPP1	Q86YN1	238 aa		10.12	□□□□□ -0.79

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