RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MYCNOSP40205 109 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 THBS3P49746 956 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 GP2P55259 537 aaKnown RBP12.2□□□□□ -0.46
SKA3-204ENST00000462482 ZP1P60852 638 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 EGFEM1PQ0D2K5 195 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 ZSCAN26Q16670 478 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 ZIK1Q3SY52 487 aaPredicted RBP12.2□□□□□ -0.46
SKA3-204ENST00000462482 OR2W3Q7Z3T1 314 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 RNF144BQ7Z419 303 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 PARP16Q8N5Y8 322 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 C5orf56Q8N8D9 126 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 RFESDQ8TAC1 157 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 MRGPRDQ8TDS7 321 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 LEAP2Q969E1 77 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 LGALS12Q96DT0 336 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 S100A13Q99584 98 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 GON7Q9BXV9 100 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 GMPPBQ9Y5P6 360 aa12.2□□□□□ -0.46
SKA3-204ENST00000462482 EI24O14681 340 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 MPZL2O60487 215 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 GAPDHP04406 335 aaKnown RBP12.19□□□□□ -0.46
SKA3-204ENST00000462482 ALPLP05186 524 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 CD2P06729 351 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 CGB3P0DN86 165 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 CGB7P0DN87 165 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 ALDH3A2P51648 485 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 KLHL30-AS1Q8NEE0 82 aa12.19□□□□□ -0.46
SKA3-204ENST00000462482 NOL4LQ96MY1 436 aaPredicted RBP12.19□□□□□ -0.46
SKA3-204ENST00000462482 TRAV24A0A0B4J272 114 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 A0A1W2PPI3 338 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 NCBP2LA6PVI3 153 aaKnown RBP12.18□□□□□ -0.46
SKA3-204ENST00000462482 CCRL2O00421 344 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 DYNC1I1O14576 645 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 ZFPL1O95159 310 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 HTR3BO95264 441 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 CSTBP04080 98 aaKnown RBP12.18□□□□□ -0.46
SKA3-204ENST00000462482 GZMHP20718 246 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 IL3RAP26951 378 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 RAB25P57735 213 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 C11orf87Q6NUJ2 197 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 C8orf86Q6ZUL3 223 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 ZNF695Q8IW36 515 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 PYDC1Q8WXC3 89 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 B9D2Q9BPU9 175 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 LINC00574Q9H8X3 128 aa12.18□□□□□ -0.46
SKA3-204ENST00000462482 PAK1IP1Q9NWT1 392 aaPredicted RBP12.18□□□□□ -0.46
SKA3-204ENST00000462482 TMEM30CPA0ZSE6 113 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 NPIPB11E5RHQ5 1161 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 AP4M1O00189 453 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 GABRPO00591 440 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 HSD17B6O14756 317 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 OR7C1O76099 320 aaPredicted RBP12.17□□□□□ -0.46
SKA3-204ENST00000462482 IGHG2P01859 326 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 SOX2P48431 317 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 PPP3R1P63098 170 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 DGCR2P98153 550 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 PAX5Q02548 391 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 RAB40BQ12829 278 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 UTF1Q5T230 341 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 RSBN1Q5VWQ0 802 aaPredicted RBP12.17□□□□□ -0.46
SKA3-204ENST00000462482 TEX38Q6PEX7 206 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 ETV3LQ6ZN32 361 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 OR10K1Q8NGX5 313 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 NEK7Q8TDX7 302 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 PDCD1LG2Q9BQ51 273 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 DPCDQ9BVM2 203 aaPredicted RBP12.17□□□□□ -0.46
SKA3-204ENST00000462482 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 ISG20L2Q9H9L3 353 aaKnown RBP12.17□□□□□ -0.46
SKA3-204ENST00000462482 ERVK13-1Q9NX77 482 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 LINC00527Q9UJ94 153 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 ING4Q9UNL4 249 aa12.17□□□□□ -0.46
SKA3-204ENST00000462482 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
SKA3-204ENST00000462482 SSTR5P35346 364 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 ZNF816Q0VGE8 651 aaPredicted RBP12.16□□□□□ -0.46
SKA3-204ENST00000462482 PIGYQ3MUY2 71 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
SKA3-204ENST00000462482 ZFP1Q6P2D0 407 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 STPG2Q8N412 459 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 STX19Q8N4C7 294 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 SUMF2Q8NBJ7 301 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 OR2T10Q8NGZ9 312 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 PLPPR1Q8TBJ4 325 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 WWC2-AS2Q96NR7 200 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 RAB9BQ9NP90 201 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 ST3GAL6Q9Y274 331 aa12.16□□□□□ -0.46
SKA3-204ENST00000462482 RPL36Q9Y3U8 105 aaKnown RBP12.16□□□□□ -0.46
SKA3-204ENST00000462482 IGHV1-3A0A0C4DH29 117 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 A0A1W2PPE3 182 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
SKA3-204ENST00000462482 RAMP3O60896 148 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 ATAD3CQ5T2N8 411 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 LINC00596Q86U02 117 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms