RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PPP3R1P63098 170 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 LCN2P80188 198 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 MEF2CQ06413 473 aaPredicted RBP4.69□□□□□ -1.66
VPS36-202ENST00000462289 GPR176Q14439 515 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 MPV17LQ2QL34 196 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 HSD17B12Q53GQ0 312 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 C19orf54Q5BKX5 351 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 LRRC10Q5BKY1 277 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 SLC16A12Q6ZSM3 486 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 KCTD8Q6ZWB6 473 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 USP43Q70EL4 1123 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 BTN2A1Q7KYR7 527 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 OR2W3Q7Z3T1 314 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 CEACAM19Q7Z692 300 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 TEX29Q8N6K0 151 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 TMEM104Q8NE00 496 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 TSPAN14Q8NG11 270 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 OR5T2Q8NGG2 359 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 OR5D18Q8NGL1 313 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 OR5D13Q8NGL4 314 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 OR6M1Q8NGM8 313 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 PTX4Q96A99 478 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 COQ2Q96H96 371 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 NUDT16L1Q9BRJ7 211 aaKnown RBP4.69□□□□□ -1.66
VPS36-202ENST00000462289 NARFLQ9H6Q4 476 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 TXNL4BQ9NX01 149 aaKnown RBP4.69□□□□□ -1.66
VPS36-202ENST00000462289 ZNF581Q9P0T4 197 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 CKLFQ9UBR5 152 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 DNAJB11Q9UBS4 358 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 SLC25A10Q9UBX3 287 aaPredicted RBP4.69□□□□□ -1.66
VPS36-202ENST00000462289 OR5V1Q9UGF6 321 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 STUB1Q9UNE7 303 aa4.69□□□□□ -1.66
VPS36-202ENST00000462289 TRBV6-6A0A0A6YYG2 114 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 A0A1W2PP11 408 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 NKX6-3A6NJ46 265 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 IFITM5A6NNB3 132 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 MARCH11A6NNE9 402 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 B5MCH6 92 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 NPIPB11E5RHQ5 1161 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 AIPO00170 330 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 MGST3O14880 152 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 NDUFB3O43676 98 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 CDRT1O95170 752 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 TFF1P04155 84 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 HCKP08631 526 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 HSMCR30P0CW71 290 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 TMEM225BP0DP42 221 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 PRTN3P24158 256 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 CEBPDP49716 269 aaPredicted RBP4.68□□□□□ -1.66
VPS36-202ENST00000462289 PSMD7P51665 324 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 P2RX3P56373 397 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 SCAND1P57086 179 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 RPS27AP62979 156 aaKnown RBP4.68□□□□□ -1.66
VPS36-202ENST00000462289 NHLH2Q02577 135 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 DCAF12L2Q5VW00 463 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 RSBN1Q5VWQ0 802 aaPredicted RBP4.68□□□□□ -1.66
VPS36-202ENST00000462289 ZNF880Q6PDB4 577 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 FIP1L1Q6UN15 594 aaKnown RBP4.68□□□□□ -1.66
VPS36-202ENST00000462289 ZNF554Q86TJ5 538 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 TPRA1Q86W33 373 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 OSR2Q8N2R0 312 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 PNLDC1Q8NA58 520 aaKnown RBP4.68□□□□□ -1.66
VPS36-202ENST00000462289 OR4S1Q8NGB4 309 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 TNFAIP8L1Q8WVP5 186 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 EMG1Q92979 244 aaKnown RBP4.68□□□□□ -1.66
VPS36-202ENST00000462289 TMEM203Q969S6 136 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 RFT1Q96AA3 541 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 WDFY2Q96P53 400 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 CCDC90BQ9GZT6 254 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS36-202ENST00000462289 C19orf12Q9NSK7 152 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 MRPS28Q9Y2Q9 187 aaKnown RBP4.68□□□□□ -1.66
VPS36-202ENST00000462289 LINC00312Q9Y6C7 94 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
VPS36-202ENST00000462289 ANK2Q01484 3957 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 A0A0A6YYD4 124 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CENPVL3A0A0U1RRI6 287 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 A0A1W2PPK0 400 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 ODF3BA8MYP8 253 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 RNASEK-C17orf49H0YIS7 233 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CLDN34H7C241 214 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 RAB27BO00194 218 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 SH2D1BO14796 132 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 GEMIN2O14893 280 aaKnown RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 MAGEB3O15480 346 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CA11O75493 328 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 GABARAPO95166 117 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 NAPSAO96009 420 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 MAS1P04201 325 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 GTF2F2P13984 249 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 MGMTP16455 207 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CD36P16671 472 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 PRKACAP17612 351 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 GADD45AP24522 165 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CALRP27797 417 aaKnown RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 PSMB9P28065 219 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CHATP28329 748 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 HTR2CP28335 458 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CAPZA1P52907 286 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms