RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 MEIKINA0A087WXM9 373 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 TRBV5-5A0A0J9YX44 114 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 J3QR06 171 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 ZNF780AO75290 641 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-207ENST00000461798 LALBAP00709 142 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 IL1AP01583 271 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 AMY1AP04745 511 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 AMY2AP04746 511 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 IGFBP3P17936 291 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-207ENST00000461798 GZMHP20718 246 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 BDKRB2P30411 391 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 MNDAP41218 407 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 VDAC2P45880 294 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-207ENST00000461798 RSU1Q15404 277 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 UTF1Q5T230 341 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 OR2G6Q5TZ20 316 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 DMKNQ6E0U4 476 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-207ENST00000461798 SATL1Q86VE3 508 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 C1QL4Q86Z23 238 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 OR4F17Q8NGA8 305 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 OR13A1Q8NGR1 328 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 OR52N1Q8NH53 320 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 PLPPR1Q8TBJ4 325 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 GHSRQ92847 366 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 SMIM19Q96E16 107 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 TMEM80Q96HE8 168 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 OR4F4Q96R69 305 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 NR1H4Q96RI1 486 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-207ENST00000461798 GPER1Q99527 375 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 CITED2Q99967 270 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-207ENST00000461798 METTL9Q9H1A3 318 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 MMP28Q9H239 520 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 PCDHB16Q9NRJ7 776 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 CALYQ9NYX4 217 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 IDI2-AS1Q9NZ38 188 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 CLEC2DQ9UHP7 191 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 HSPE1-MOB4S4R3N1 261 aa7.31□□□□□ -1.24
BRCA1-207ENST00000461798 PRKDCP78527 4128 aaKnown RBP7.31□□□□□ -1.24
BRCA1-207ENST00000461798 KIAA2026Q5HYC2 2103 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 G3V4G9 280 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 M0QZK8 103 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 XPNPEP2O43895 674 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 PEX14O75381 377 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 CDRT1O95170 752 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 HTR3BO95264 441 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 CLIC3O95833 236 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 CD1AP06126 327 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 FAM106CPP0CH98 169 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 MYL12AP19105 171 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 CD24P25063 80 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 ZNF93P35789 620 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-207ENST00000461798 OR3A4PP47883 348 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 RPS11P62280 158 aaKnown RBP eCLIP7.3□□□□□ -1.24
BRCA1-207ENST00000461798 PPP3R1P63098 170 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 PIGYQ3MUY2 71 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 Q499Y3 187 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 FBLN7Q53RD9 439 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 YIF1BQ5BJH7 314 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 LINC00596Q86U02 117 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 CDH26Q8IXH8 852 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 LYG1Q8N1E2 194 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 OSR2Q8N2R0 312 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 DHRSXQ8N5I4 330 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 SUMF2Q8NBJ7 301 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 SETD9Q8NE22 299 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 OR5AU1Q8NGC0 362 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 OR10K1Q8NGX5 313 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 GGHQ92820 318 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 OR5M11Q96RB7 305 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 SLC25A33Q9BSK2 321 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 DPCDQ9BVM2 203 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-207ENST00000461798 PAK1IP1Q9NWT1 392 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-207ENST00000461798 ING3Q9NXR8 418 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 ING4Q9UNL4 249 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 PSG11Q9UQ72 335 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 ST3GAL6Q9Y274 331 aa7.3□□□□□ -1.24
BRCA1-207ENST00000461798 AMMECR1Q9Y4X0 333 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-207ENST00000461798 TRBV5-7A0A0A0MS05 114 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 FAM172BPA6NC97 362 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 HSPB6O14558 160 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 CSTBP04080 98 aaKnown RBP7.29□□□□□ -1.24
BRCA1-207ENST00000461798 NFYBP25208 207 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 GLP1RP43220 463 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 RAB7AP51149 207 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 RBM11P57052 281 aaKnown RBP7.29□□□□□ -1.24
BRCA1-207ENST00000461798 ST3GAL4Q11206 333 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 MADCAM1Q13477 382 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 MED21Q13503 144 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 RIPK1Q13546 671 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 GPR176Q14439 515 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 NSUN5P1Q3KNT7 163 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 TMEM95Q3KNT9 176 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 TCTEX1D4Q5JR98 221 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 DDI2Q5TDH0 399 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 LAIR2Q6ISS4 152 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 REC114Q7Z4M0 266 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 CENPVQ7Z7K6 275 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-207ENST00000461798 LYPD6Q86Y78 171 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms