RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 RBMXL1Q96E39 390 aaKnown RBP12.39□□□□□ -0.43
NUP50-213ENST00000461437 OR14A2Q96R54 314 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 ZNF184Q99676 751 aaPredicted RBP12.39□□□□□ -0.43
NUP50-213ENST00000461437 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 DPCDQ9BVM2 203 aaPredicted RBP12.39□□□□□ -0.43
NUP50-213ENST00000461437 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 TMEM138Q9NPI0 162 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 DNAH3Q8TD57 4116 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 A0A087X0M5 115 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 A0A1B0GX30 115 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 IL1AP01583 271 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 ALDOBP05062 364 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 LPLP06858 475 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 C21orf33P30042 268 aaPredicted RBP12.38□□□□□ -0.43
NUP50-213ENST00000461437 RBM11P57052 281 aaKnown RBP12.38□□□□□ -0.43
NUP50-213ENST00000461437 RIPK1Q13546 671 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 SLC22A6Q4U2R8 563 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 ATAD3CQ5T2N8 411 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 AHSA2Q719I0 299 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 SETD9Q8NE22 299 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 Q8NFD4 153 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 OR52N1Q8NH53 320 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 HAVCR2Q8TDQ0 301 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 CAPSLQ8WWF8 208 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 MUL1Q969V5 352 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 PSG11Q9UQ72 335 aa12.38□□□□□ -0.43
NUP50-213ENST00000461437 IGHV3-43A0A0B4J1X8 118 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 IRGMA1A4Y4 181 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 J3QR06 171 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 OPN1MWP04001 364 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 CSTBP04080 98 aaKnown RBP12.37□□□□□ -0.43
NUP50-213ENST00000461437 MAS1P04201 325 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 AMY1AP04745 511 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 AMY2AP04746 511 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 OPN1MW2P0DN77 364 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 OPN1MW3P0DN78 364 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 IGHV3-43DP0DP04 118 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 BRS3P32247 399 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 CAPGP40121 348 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 PRRX1P54821 245 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 INSL4Q14641 139 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 PACRGLQ8N7B6 248 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 BPIFB6Q8NFQ5 453 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 OR56B4Q8NH76 319 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 OR9G1Q8NH87 305 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 TOMM40LQ969M1 308 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 R3HDM4Q96D70 268 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 CPNE2Q96FN4 548 aaPredicted RBP12.37□□□□□ -0.43
NUP50-213ENST00000461437 BARHL1Q9BZE3 327 aa12.37□□□□□ -0.43
NUP50-213ENST00000461437 CHCHD3Q9NX63 227 aaKnown RBP12.37□□□□□ -0.43
NUP50-213ENST00000461437 PIN1P1O15428 100 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 OR2F2O95006 317 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 SNRNP70P08621 437 aaKnown RBP12.36□□□□□ -0.43
NUP50-213ENST00000461437 VHLP40337 213 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 BEAN1Q3B7T3 259 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 Q499Y3 187 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 OXLD1Q5BKU9 147 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 TCTEX1D4Q5JR98 221 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 OGFRL1Q5TC84 451 aaPredicted RBP12.36□□□□□ -0.43
NUP50-213ENST00000461437 C5orf24Q7Z6I8 188 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 C8orf59Q8N0T1 100 aaPredicted RBP12.36□□□□□ -0.43
NUP50-213ENST00000461437 JAGN1Q8N5M9 183 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 DRAM1Q8N682 238 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 ZNF565Q8N9K5 539 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 RPEQ96AT9 228 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 RBM14Q96PK6 669 aaKnown RBP12.36□□□□□ -0.43
NUP50-213ENST00000461437 S100A13Q99584 98 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 BANF2Q9H503 90 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 PSORS1C1Q9UIG5 152 aa12.36□□□□□ -0.43
NUP50-213ENST00000461437 TRBV5-7A0A0A0MS05 114 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 A0A1W2PPI3 338 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 NPIPB11E5RHQ5 1161 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 CEACAM3P40198 252 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 REG1BP48304 166 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 HNF4GQ14541 408 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 YIF1BQ5BJH7 314 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 SAMD5Q5TGI4 173 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 GLIPR1L1Q6UWM5 242 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 NEK7Q8TDX7 302 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 SGCDQ92629 289 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 IL36GQ9NZH8 169 aa12.35□□□□□ -0.43
NUP50-213ENST00000461437 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
NUP50-213ENST00000461437 MRPS28Q9Y2Q9 187 aaKnown RBP12.35□□□□□ -0.43
NUP50-213ENST00000461437 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 EFCAB10A6NFE3 127 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 MYL12BO14950 172 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 CELP19835 753 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 MED21Q13503 144 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 STX19Q8N4C7 294 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 FBLIM1Q8WUP2 373 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 DERL3Q96Q80 235 aa12.34□□□□□ -0.43
NUP50-213ENST00000461437 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 C15orf65H3BRN8 121 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 CASQ2O14958 399 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms