RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PLEKHJ1Q9NW61 149 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 RHBDL2Q9NX52 303 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ONECUT1Q9UBC0 465 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 LPAR3Q9UBY5 353 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 RSL24D1Q9UHA3 163 aaKnown RBP9.26□□□□□ -0.93
SSBP1-202ENST00000461433 KPTNQ9Y664 436 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 AUP1Q9Y679 476 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 MEIKINA0A087WXM9 373 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 TRAV39A0A0B4J263 110 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 SMIM31A0A1B0GVY4 71 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 hADV38S2A0JD32 116 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 TMEM30CPA0ZSE6 113 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 FUOMA2VDF0 154 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 METTL21EPA6NDL7 271 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 CCDC160A6NGH7 325 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 C17orf98A8MV24 154 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 INAFM1C9JVW0 142 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 M0R1W7 72 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 NOL3O60936 208 aaKnown RBP9.25□□□□□ -0.93
SSBP1-202ENST00000461433 FSHBP01225 129 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF728P0DKX0 622 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 DYNC1I2Q13409 638 aaKnown RBP9.25□□□□□ -0.93
SSBP1-202ENST00000461433 FAM189A2Q15884 450 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 C17orf58Q2M2W7 97 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 NEK7Q8TDX7 302 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 ACOT12Q8WYK0 555 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 TNFRSF14Q92956 283 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 UPRTQ96BW1 309 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 ABCG5Q9H222 651 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 ETAA1Q9NY74 926 aa9.25□□□□□ -0.93
SSBP1-202ENST00000461433 UBE2J1Q9Y385 318 aaPredicted RBP9.25□□□□□ -0.93
SSBP1-202ENST00000461433 ANK3Q12955 4377 aaKnown RBP9.25□□□□□ -0.93
SSBP1-202ENST00000461433 MFNGO00587 321 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 CA11O75493 328 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 MMP23AO75900 390 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 TOX4O94842 621 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 NAPSAO96009 420 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 GNB3P16520 340 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 KLF17Q5JT82 389 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 UBE2NLQ5JXB2 153 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 METTL11BQ5VVY1 283 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 IL17RELQ6ZVW7 336 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 SAMD12Q8N8I0 201 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 OR4K15Q8NH41 348 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 MRPL30Q8TCC3 161 aaKnown RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 RAB3CQ96E17 227 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF714Q96N38 554 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 PCGF1Q9BSM1 259 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 SLIRPQ9GZT3 109 aaKnown RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 UNKLQ9H9P5 680 aaKnown RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 ZMAT3Q9HA38 289 aaKnown RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 TAS2R3Q9NYW6 316 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 OR6C3Q9NZP0 311 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 CCDC59Q9P031 241 aaKnown RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 COMMD3Q9UBI1 195 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 AK3Q9UIJ7 227 aa9.24□□□□□ -0.93
SSBP1-202ENST00000461433 ELF5Q9UKW6 265 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 TEP1Q99973 2627 aaKnown RBP9.24□□□□□ -0.93
SSBP1-202ENST00000461433 TRGV10A0A0A0MS01 117 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 A6NHS1 94 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 EIF4EP06730 217 aaKnown RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 HIST1H1DP16402 221 aaKnown RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 PRTN3P24158 256 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 GDNFP39905 211 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 PRB3Q04118 309 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 HCP5Q6MZN7 132 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 VMO1Q7Z5L0 202 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF565Q8N9K5 539 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 MRGPRDQ8TDS7 321 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 CCDC107Q8WV48 283 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 DGCR14Q96DF8 476 aaKnown RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 CMTM3Q96MX0 182 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 HDHD3Q9BSH5 251 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 LINC00574Q9H8X3 128 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 SIRT7Q9NRC8 400 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 NDUFA13Q9P0J0 144 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 SONP18583 2426 aaKnown RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 HIVEP2P31629 2446 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 FN1P02751 2386 aaKnown RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 A0A1W2PPH5 198 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF729A6NN14 1252 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 NPIPB11E5RHQ5 1161 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 C15orf65H3BRN8 121 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 HPGDSO60760 199 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 RBP4P02753 201 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 RCC1P18754 421 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 ELK1P19419 428 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 CDK2P24941 298 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 SOX6P35712 828 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF260Q3ZCT1 412 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 CDNFQ49AH0 187 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF880Q6PDB4 577 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 C5orf24Q7Z6I8 188 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 TRAPPC6BQ86SZ2 158 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 AP3S1Q92572 193 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 NXF2Q9GZY0 626 aaKnown RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 MIXL1Q9H2W2 232 aa9.23□□□□□ -0.93
SSBP1-202ENST00000461433 METTL8Q9H825 291 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms