RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 VMO1Q7Z5L0 202 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 TRAPPC6BQ86SZ2 158 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 PLPPR1Q8TBJ4 325 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 NAA50Q9GZZ1 169 aaKnown RBP18.44■□□□□ 0.54
C9orf3-209ENST00000460573 GAL3ST2Q9H3Q3 398 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 MEIKINA0A087WXM9 373 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 TMEM30CPA0ZSE6 113 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 ZNF701M0R085 212 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-209ENST00000460573 TMBIM6P55061 237 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 DLX6P56179 175 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 BRICD5Q6PL45 260 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 USP43Q70EL4 1123 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 CLVS1Q8IUQ0 354 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-209ENST00000460573 RAB2BQ8WUD1 216 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 SLC25A46Q96AG3 418 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 OCEL1Q9H607 264 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 PLEKHJ1Q9NW61 149 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 ING3Q9NXR8 418 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 ETAA1Q9NY74 926 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 ABRACLQ9P1F3 81 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 KIF25Q9UIL4 384 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 NUP50Q9UKX7 468 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 HSF4Q9ULV5 492 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 ETV7Q9Y603 341 aa18.43■□□□□ 0.54
C9orf3-209ENST00000460573 DNHD1Q96M86 4753 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 A0A0A6YYD4 124 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 A0A0B4J203 849 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 CCL3L1P16619 93 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 VEGFCP49767 419 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 ERVFRD-1P60508 538 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 SRSF2Q01130 221 aaKnown RBP18.42■□□□□ 0.54
C9orf3-209ENST00000460573 GUCA2AQ02747 115 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 KRTAP24-1Q3LI83 254 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 KLF17Q5JT82 389 aaPredicted RBP18.42■□□□□ 0.54
C9orf3-209ENST00000460573 NKAPLQ5M9Q1 402 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 GPR157Q5UAW9 335 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 NCR3LG1Q68D85 454 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 ZNF497Q6ZNH5 498 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 TCF23Q7RTU1 214 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 C11orf42Q8N5U0 333 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 C19orf24Q9BVV8 132 aa18.42■□□□□ 0.54
C9orf3-209ENST00000460573 FBN1P35555 2871 aaKnown RBP18.42■□□□□ 0.54
C9orf3-209ENST00000460573 ZNF729A6NN14 1252 aaPredicted RBP18.41■□□□□ 0.54
C9orf3-209ENST00000460573 FOXI3A8MTJ6 420 aaPredicted RBP18.41■□□□□ 0.54
C9orf3-209ENST00000460573 SCGNO76038 276 aa18.41■□□□□ 0.54
C9orf3-209ENST00000460573 Q6ZTK2 550 aa18.41■□□□□ 0.54
C9orf3-209ENST00000460573 GAPTQ8N292 157 aa18.41■□□□□ 0.54
C9orf3-209ENST00000460573 HEXA-AS1Q9H8Q6 139 aa18.41■□□□□ 0.54
C9orf3-209ENST00000460573 SIRT7Q9NRC8 400 aa18.41■□□□□ 0.54
C9orf3-209ENST00000460573 TRAV40A0A0B4J280 105 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 CENPVL3A0A0U1RRI6 287 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 UBE2QL1A1L167 161 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 SOCS1O15524 211 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 NOL3O60936 208 aaKnown RBP18.4■□□□□ 0.54
C9orf3-209ENST00000460573 MT-ND4P03905 459 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 SNRPBP14678 240 aaKnown RBP18.4■□□□□ 0.54
C9orf3-209ENST00000460573 GZMHP20718 246 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 EFNB2P52799 333 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 PLA2G7Q13093 441 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 C6orf201Q7Z4U5 140 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 LGALS14Q8TCE9 139 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 TNFRSF14Q92956 283 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 LHX4Q969G2 390 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 KCTD12Q96CX2 325 aaKnown RBP18.4■□□□□ 0.54
C9orf3-209ENST00000460573 SULT4A1Q9BR01 284 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 RBM38Q9H0Z9 239 aaKnown RBP18.4■□□□□ 0.54
C9orf3-209ENST00000460573 DCSTAMPQ9H295 470 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 SPATA2Q9UM82 520 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 CUBNO60494 3623 aa18.4■□□□□ 0.54
C9orf3-209ENST00000460573 MXRA5Q9NR99 2828 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 DSCAML1Q8TD84 2053 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 HAX1O00165 279 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 PAHP00439 452 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 CGB3P0DN86 165 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 CGB7P0DN87 165 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 FPR2P25090 351 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 RORCP51449 518 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 TMEM50BP56557 158 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 ARL6IP1Q15041 203 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 OR10R2Q8NGX6 335 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 FAAP24Q9BTP7 215 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 ATG5Q9H1Y0 275 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 RIMS4Q9H426 269 aaPredicted RBP18.39■□□□□ 0.53
C9orf3-209ENST00000460573 CEPT1Q9Y6K0 416 aa18.39■□□□□ 0.53
C9orf3-209ENST00000460573 KBTBD11-OT1A0A1B0GTJ5 212 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 CLPXO76031 633 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 IGHV1-8P0DP01 117 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 IGHV4-38-2P0DP08 117 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 EPHA1P21709 976 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 GLP1RP43220 463 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 UBE2E1P51965 193 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 DYNC1I2Q13409 638 aaKnown RBP18.38■□□□□ 0.53
C9orf3-209ENST00000460573 OR52W1Q6IF63 320 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 TRAT1Q6PIZ9 186 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 HEPN1Q6WQI6 88 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 C9orf139Q6ZV77 190 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 OR13A1Q8NGR1 328 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 RAB3CQ96E17 227 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 PECRQ9BY49 303 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 MS4A7Q9GZW8 240 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms