RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 ZNF396Q96N95 335 aaPredicted RBP0.67□□□□□ -2.3
TTC3-211ENST00000460328 MRPL32Q9BYC8 188 aaKnown RBP0.67□□□□□ -2.3
TTC3-211ENST00000460328 SLC25A31Q9H0C2 315 aa0.67□□□□□ -2.3
TTC3-211ENST00000460328 FBXL15Q9H469 300 aa0.67□□□□□ -2.3
TTC3-211ENST00000460328 TDRD3Q9H7E2 651 aaKnown RBP0.67□□□□□ -2.3
TTC3-211ENST00000460328 ANKHQ9HCJ1 492 aa0.67□□□□□ -2.3
TTC3-211ENST00000460328 ACOT13Q9NPJ3 140 aa0.67□□□□□ -2.3
TTC3-211ENST00000460328 RABL2AQ9UBK7 228 aaPredicted RBP0.67□□□□□ -2.3
TTC3-211ENST00000460328 PEF1Q9UBV8 284 aaKnown RBP0.67□□□□□ -2.3
TTC3-211ENST00000460328 AP3M1Q9Y2T2 418 aa0.67□□□□□ -2.3
TTC3-211ENST00000460328 V9GYY9 64 aa0.67□□□□□ -2.3
TTC3-211ENST00000460328 ARHGAP32A7KAX9 2087 aa0.67□□□□□ -2.3
TTC3-211ENST00000460328 CRB1P82279 1406 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 LOC102725191A0A1B0GVB3 256 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 IGSF23A1L1A6 192 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 F8VP50 259 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 MYO1DO94832 1006 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 GPR4P46093 362 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 XKP51811 444 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 EMP2P54851 167 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 PSMC5P62195 406 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 FAM19A3Q7Z5A8 133 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 LINC00523Q86TU6 105 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 CYP4Z1Q86W10 505 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 SELENOHQ8IZQ5 122 aaKnown RBP0.66□□□□□ -2.3
TTC3-211ENST00000460328 ZNF321PQ8N8H1 164 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 REEP6Q96HR9 211 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 MAP1LC3CQ9BXW4 147 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 CRLF2Q9HC73 371 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 LZTFL1Q9NQ48 299 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 PSME2Q9UL46 239 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 MINOS1-NBL1R4GNA1 71 aa0.66□□□□□ -2.3
TTC3-211ENST00000460328 POLR3AO14802 1390 aaPredicted RBP0.66□□□□□ -2.3
TTC3-211ENST00000460328 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
TTC3-211ENST00000460328 MDC1Q14676 2089 aaKnown RBP0.66□□□□□ -2.3
TTC3-211ENST00000460328 NRCAMQ92823 1304 aa0.65□□□□□ -2.3
TTC3-211ENST00000460328 TRAV8-3A0A0A6YYJ7 113 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 A0A1W2PPV4 95 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 ARGFXA6NJG6 315 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 A8MWP6 167 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 H0YIV9 168 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 PLPP3O14495 311 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 RFXANKO14593 260 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 CASC3O15234 703 aaKnown RBP0.65□□□□□ -2.31
TTC3-211ENST00000460328 KDELR3O43731 214 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 HMMRO75330 724 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 SC5DO75845 299 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 CD8AP01732 235 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 CECR9P0C854 216 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 ZNF3P17036 446 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 DEFA6Q01524 100 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 PRB3Q04118 309 aaPredicted RBP0.65□□□□□ -2.31
TTC3-211ENST00000460328 TSPAN31Q12999 210 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 FAM229BQ4G0N7 80 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 C10orf107Q8IVU9 208 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 FAM58AQ8N1B3 248 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 SLC25A45Q8N413 288 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 DRAXINQ8NBI3 349 aaPredicted RBP0.65□□□□□ -2.31
TTC3-211ENST00000460328 OR2AE1Q8NHA4 323 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 PDCD6IPQ8WUM4 868 aaKnown RBP0.65□□□□□ -2.31
TTC3-211ENST00000460328 FAM131CQ96AQ9 280 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 HSPB9Q9BQS6 159 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 IFNKQ9P0W0 207 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 PSORS1C2Q9UIG4 136 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 CCDC88CQ9P219 2028 aa0.65□□□□□ -2.31
TTC3-211ENST00000460328 ARAP3Q8WWN8 1544 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 IGKV1-12A0A0C4DH73 117 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 PGPA6NDG6 321 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 ZNF593O00488 134 aaPredicted RBP0.64□□□□□ -2.31
TTC3-211ENST00000460328 SOX14O95416 240 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 IGKV1D-12P01611 117 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 GPX1P07203 203 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 STX4Q12846 297 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 HTR4Q13639 388 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 ACTL10Q5JWF8 245 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 CLEC20AQ6ZU45 233 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 NIT1Q86X76 327 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 KRTCAP2Q8N6L1 136 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 ZIC4Q8N9L1 334 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 SUN5Q8TC36 379 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 KCTD4Q8WVF5 259 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 VAT1Q99536 393 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 GPR22Q99680 433 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 BCL7BQ9BQE9 202 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 POTEKPQ9BYX7 375 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 NXF2Q9GZY0 626 aaKnown RBP0.64□□□□□ -2.31
TTC3-211ENST00000460328 SDHAF2Q9NX18 166 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 DNAJC27Q9NZQ0 273 aa0.64□□□□□ -2.31
TTC3-211ENST00000460328 MUC21A0A0G2JKD1 596 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 MUC21A0A140T8X8 626 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 J3QLI3 93 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 PRMT5O14744 637 aaPredicted RBP0.63□□□□□ -2.31
TTC3-211ENST00000460328 SPOPO43791 374 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 NAPSAO96009 420 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 CA2P00918 260 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 CRYGDP07320 174 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 TPM2P07951 284 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 SFTPCP11686 197 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 OR2B6P58173 313 aa0.63□□□□□ -2.31
TTC3-211ENST00000460328 C2orf80Q0P641 193 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms