RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 KNL1Q8NG31 2342 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 CDC14CA4D256 554 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 DHHO43323 396 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 BMI1P35226 326 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 ZNF718Q3SXZ3 478 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 SLC25A26Q70HW3 274 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
UFD1-205ENST00000459854 CARFQ8N187 725 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 OR2M3Q8NG83 312 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 APOBEC3DQ96AK3 386 aaPredicted RBP8.62□□□□□ -1.03
UFD1-205ENST00000459854 HSPB9Q9BQS6 159 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 SLC25A22Q9H936 323 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 TMEM38BQ9NVV0 291 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 ANXA10Q9UJ72 324 aa8.62□□□□□ -1.03
UFD1-205ENST00000459854 TGIF2-C20orf24A0A0A6YYL0 155 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 LINC01387J3KSC0 135 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 TRGC2P03986 189 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 GLI4P10075 376 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 HIST1H1BP16401 226 aaKnown RBP8.61□□□□□ -1.03
UFD1-205ENST00000459854 VAX1Q5SQQ9 334 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 KIRREL2Q6UWL6 708 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 LILRA3Q8N6C8 439 aaPredicted RBP8.61□□□□□ -1.03
UFD1-205ENST00000459854 TMEM74BQ9NUR3 256 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 A0A1B0GX78 115 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 LOC390937A0A1W2PQ73 354 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 H3BP45 60 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 EPPINO95925 133 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 OR1D5P58170 312 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 TRIP6Q15654 476 aaKnown RBP8.61□□□□□ -1.03
UFD1-205ENST00000459854 CD226Q15762 336 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 MMP25Q9NPA2 562 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 CACNG5Q9UF02 275 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 STARD10Q9Y365 291 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 ANKRD12Q6UB98 2062 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 KCNE1BA0A087WTH5 132 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 NKX2-2O95096 273 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 GABRA6Q16445 453 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 CCSMST1Q4G0I0 132 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 SLC22A18ASQ8N1D0 253 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 CA13Q8N1Q1 262 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 SPAG17Q6Q759 2223 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 OR2W5A6NFC9 320 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 TRDCB7Z8K6 153 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 SLC17A3O00476 420 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 MPDU1O75352 247 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 P01737 135 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 LPAR6P43657 344 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 OR2I1PQ8NGU4 316 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 RDH5Q92781 318 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 PECRQ9BY49 303 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 OR51B6Q9H340 312 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 FSCN3Q9NQT6 498 aa8.61□□□□□ -1.03
UFD1-205ENST00000459854 CISD1Q9NZ45 108 aaKnown RBP8.61□□□□□ -1.03
UFD1-205ENST00000459854 TRBV5-3A0A0A0MS03 114 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 PMS2P1A4D2B8 440 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 CTSVO60911 334 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 ALOX12BO75342 701 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 KLF7O75840 302 aaPredicted RBP8.6□□□□□ -1.03
UFD1-205ENST00000459854 CRYABP02511 175 aaKnown RBP8.6□□□□□ -1.03
UFD1-205ENST00000459854 GLIPR1P48060 266 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 DEFB124Q8NES8 71 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 RHOVQ96L33 236 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 OR4C12Q96R67 309 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 OPN3Q9H1Y3 402 aaPredicted RBP8.6□□□□□ -1.03
UFD1-205ENST00000459854 SRD5A3Q9H8P0 318 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 TUBD1Q9UJT1 453 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 SHISA7A6NL88 538 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 FGF17O60258 216 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 FOLR2P14207 255 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 CAPZBP47756 277 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 EDDM3AQ14507 147 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 SP6Q3SY56 376 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 ZNF362Q5T0B9 420 aaPredicted RBP8.6□□□□□ -1.03
UFD1-205ENST00000459854 OLIG3Q7RTU3 272 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 KMT5CQ86Y97 462 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 C17orf47Q8NEP4 570 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 NUDT8Q8WV74 236 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 PATE1Q8WXA2 126 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 DENND4CQ5VZ89 1909 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 A0A087WWC5 75 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 LOC102724200A0A096LPH7 203 aaPredicted RBP8.6□□□□□ -1.03
UFD1-205ENST00000459854 OR2A4O95047 310 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
UFD1-205ENST00000459854 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
UFD1-205ENST00000459854 TMEM211Q6ICI0 200 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 BAHD1Q8TBE0 780 aaPredicted RBP8.6□□□□□ -1.03
UFD1-205ENST00000459854 OR2A7Q96R45 310 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 NDUFAF3Q9BU61 184 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 LPAR5Q9H1C0 372 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 TRAV9-1A0A075B6T8 112 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 IER3P46695 156 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 GNG3P63215 75 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 LCN2P80188 198 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 FAM53BQ14153 422 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 ERV3-1Q14264 604 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 MRGPREQ86SM8 312 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms