RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CCNKO75909 580 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 HPXP02790 462 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 NPY4RP50391 375 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 FAM201AQ5SY85 155 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 STUMQ69YW2 141 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 OR4A4PQ8NGN8 299 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 SNX22Q96L94 193 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 ZNF221Q9UK13 617 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 TRAPPC2LQ9UL33 140 aa20.45■□□□□ 0.86
U2AF1-204ENST00000459639 ZFYVE26Q68DK2 2539 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 OOEPA6NGQ2 149 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 SCTP09683 121 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 RCC1P18754 421 aaPredicted RBP20.44■□□□□ 0.86
U2AF1-204ENST00000459639 GABRA2P47869 451 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 SLC25A42Q86VD7 318 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 TGIF2LYQ8IUE0 185 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 COQ2Q96H96 371 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 SHARPINQ9H0F6 387 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 CBLN4Q9NTU7 201 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 ING3Q9NXR8 418 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 DSCAMO60469 2012 aa20.44■□□□□ 0.86
U2AF1-204ENST00000459639 HNRNPCP07910 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
U2AF1-204ENST00000459639 OR4E1P0C645 316 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 TAS2R31P59538 309 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 CD300CQ08708 224 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 IGSF11Q5DX21 431 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 FAHD2BQ6P2I3 314 aaPredicted RBP20.43■□□□□ 0.86
U2AF1-204ENST00000459639 CAPSLQ8WWF8 208 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 FAHD2AQ96GK7 314 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 CABLES2Q9BTV7 478 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 TMEM106BQ9NUM4 274 aa20.43■□□□□ 0.86
U2AF1-204ENST00000459639 TMEM178BH3BS89 294 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 SSNA1O43805 119 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 FCGR2CP31995 323 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 HERPUD1Q15011 391 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 C4orf46Q504U0 113 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 ZNF561Q8N587 486 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 SDSLQ96GA7 329 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 LIME1Q9H400 295 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 DCAF16Q9NXF7 216 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 ZNF69Q9UC07 566 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 LGALS8O00214 317 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 UBE2MP61081 183 aaKnown RBP20.42■□□□□ 0.86
U2AF1-204ENST00000459639 AESQ08117 197 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 HMGN3Q15651 99 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 C5orf66Q9H5L9 145 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 KIF25Q9UIL4 384 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 PCDHB10Q9UN67 800 aa20.42■□□□□ 0.86
U2AF1-204ENST00000459639 SMG1Q96Q15 3661 aaKnown RBP20.41■□□□□ 0.86
U2AF1-204ENST00000459639 K7N7A8 449 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 MGST3O14880 152 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 GOSR1O95249 250 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 TK1P04183 234 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 SEC61A1P61619 476 aaKnown RBP20.41■□□□□ 0.86
U2AF1-204ENST00000459639 FCN2Q15485 313 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 KRBOX4Q5JUW0 171 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 C11orf71Q6IPW1 123 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 TMEM185AQ8NFB2 350 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 OR52B4Q8NGK2 314 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 ZNF431Q8TF32 576 aaPredicted RBP20.41■□□□□ 0.86
U2AF1-204ENST00000459639 ST6GAL2Q96JF0 529 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 VRK1Q99986 396 aaPredicted RBP20.41■□□□□ 0.86
U2AF1-204ENST00000459639 FXYD6Q9H0Q3 95 aa20.41■□□□□ 0.86
U2AF1-204ENST00000459639 ABCA4P78363 2273 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 TRAV38-1A0A0B4J264 116 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 IGKV1-6A0A0C4DH72 117 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 IGHV1-69-2A0A0G2JMI3 117 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 DIRAS3O95661 229 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 PGAM2P15259 253 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 MEX3BQ6ZN04 569 aaKnown RBP20.4■□□□□ 0.86
U2AF1-204ENST00000459639 DTX2Q86UW9 622 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 CCL17Q92583 94 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 MOB3AQ96BX8 217 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 TMPRSS13Q9BYE2 586 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 ZNF665Q9H7R5 613 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 MAB21L2Q9Y586 359 aa20.4■□□□□ 0.86
U2AF1-204ENST00000459639 KLF2Q9Y5W3 355 aaPredicted RBP20.4■□□□□ 0.86
U2AF1-204ENST00000459639 PPIAL4EA0A075B759 164 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 A6NNC1 897 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 NPIPB11E5RHQ5 1161 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 PPIAL4DF5H284 164 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 BOLA2-SMG1P6H3BVE0 249 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 BET1O15155 118 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 ZNF205O95201 554 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 PPIAL4FP0DN26 164 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 ZNF788Q6ZQV5 615 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 ADAD2Q8NCV1 583 aaKnown RBP20.39■□□□□ 0.86
U2AF1-204ENST00000459639 KCNIP1Q9NZI2 227 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 PPIAL4AQ9Y536 164 aa20.39■□□□□ 0.86
U2AF1-204ENST00000459639 MEIKINA0A087WXM9 373 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 PPYP01298 95 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 DANCRP0C864 163 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 SULT1A3P0DMM9 295 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 SULT1A4P0DMN0 295 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 NFYAP23511 347 aaPredicted RBP20.38■□□□□ 0.85
U2AF1-204ENST00000459639 UCP3P55916 312 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 HERV-K104P61576 105 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 BAMBIQ13145 260 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 DHRS2Q13268 280 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 C6orf183Q5T699 404 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms