RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MINOS1Q5TGZ0 78 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 ZNF596Q8TC21 504 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 CREB3L1Q96BA8 519 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 CLEC7AQ9BXN2 247 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 BANF2Q9H503 90 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 NDUFB11Q9NX14 153 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 MINOS1-NBL1R4GNA1 71 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 TRDV1A0A1B0GX56 115 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 A0A1W2PP11 408 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 TOR1AO14656 332 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 SLC22A1O15245 554 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 CA11O75493 328 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 IGHV4-59P01825 116 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 FUT3P21217 361 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 PSMB9P28065 219 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 PRRX1P54821 245 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 RSBN1Q5VWQ0 802 aaPredicted RBP13.14□□□□□ -0.31
CD28-203ENST00000458610 ZNF626Q68DY1 528 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 ABHD12Q8N2K0 398 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 OR10A7Q8NGE5 316 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 CHIAQ9BZP6 476 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 PPIL3Q9H2H8 161 aaKnown RBP13.14□□□□□ -0.31
CD28-203ENST00000458610 PEX16Q9Y5Y5 336 aa13.14□□□□□ -0.31
CD28-203ENST00000458610 IGHV2-26A0A0B4J1V2 119 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 TRAV1-2A0A0B4J238 106 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 FAM181BA6NEQ2 426 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 ODF3BA8MYP8 253 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 SLC17A2O00624 439 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 MPIG6BO95866 241 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 MYL9P24844 172 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 GLP1RP43220 463 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 SSX1Q16384 188 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 LRRC75BQ2VPJ9 315 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 RAB12Q6IQ22 244 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 CD200R1LQ6Q8B3 271 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 SLC16A12Q6ZSM3 486 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 DTX3Q8N9I9 347 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 TMEM104Q8NE00 496 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 PLPPR1Q8TBJ4 325 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 Q96M66 194 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 NEDD4LQ96PU5 975 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 SSX3Q99909 188 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 URM1Q9BTM9 101 aaKnown RBP13.13□□□□□ -0.31
CD28-203ENST00000458610 TMEM59Q9BXS4 323 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 RCC2Q9P258 522 aaKnown RBP13.13□□□□□ -0.31
CD28-203ENST00000458610 VPREB3Q9UKI3 123 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 AK6Q9Y3D8 172 aaKnown RBP13.13□□□□□ -0.31
CD28-203ENST00000458610 V9GY05 133 aa13.13□□□□□ -0.31
CD28-203ENST00000458610 FBN1P35555 2871 aaKnown RBP13.12□□□□□ -0.31
CD28-203ENST00000458610 CGB3P0DN86 165 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 CGB7P0DN87 165 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 VSIG8P0DPA2 414 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 ARSBP15848 533 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 HTR1DP28221 377 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 ARHGDIBP52566 201 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 RAB11BQ15907 218 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 C17orf58Q2M2W7 97 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 PRAMEF5Q5TYX0 476 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 OR2W3Q7Z3T1 314 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 C3orf56Q8N813 242 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 OR13A1Q8NGR1 328 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 OR4F5Q8NH21 305 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 NDNFQ8TB73 568 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 MRGPRDQ8TDS7 321 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 FAM46BQ96A09 425 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 LINC00574Q9H8X3 128 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 VCX3AQ9NNX9 186 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 ABCB10Q9NRK6 738 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 ETAA1Q9NY74 926 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 CALYQ9NYX4 217 aa13.12□□□□□ -0.31
CD28-203ENST00000458610 A0A087X0M5 115 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 A0A1B0GX30 115 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 POM121CA8CG34 1229 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 AIPO00170 330 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 ORC5O43913 435 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 GPR137BO60478 399 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 PDCD6O75340 191 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 IL1AP01583 271 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 MT-ND4P03905 459 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 CD34P28906 385 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 CEACAM3P40198 252 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
CD28-203ENST00000458610 FAM189A2Q15884 450 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 ZNF497Q6ZNH5 498 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 LIAT1Q6ZQX7 453 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 BEX1Q9HBH7 125 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 RAB18Q9NP72 206 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 IDI2-AS1Q9NZ38 188 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 DPM3Q9P2X0 92 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 TRAPPC2LQ9UL33 140 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 SSR3Q9UNL2 185 aa13.11□□□□□ -0.31
CD28-203ENST00000458610 VGLL3A8MV65 326 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 LEUTXA8MZ59 168 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 NPIPB11E5RHQ5 1161 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 H3BUX3 64 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms